RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 UBTD1Q9HAC8 227 aa13.63□□□□□ -0.23
VPS8-213ENST00000453056 OBP2BQ9NPH6 170 aa13.63□□□□□ -0.23
VPS8-213ENST00000453056 RNF115Q9Y4L5 304 aa13.63□□□□□ -0.23
VPS8-213ENST00000453056 V9GYQ6 96 aa13.63□□□□□ -0.23
VPS8-213ENST00000453056 USF3Q68DE3 2245 aa13.63□□□□□ -0.23
VPS8-213ENST00000453056 PRRC2AP48634 2157 aaKnown RBP13.62□□□□□ -0.23
VPS8-213ENST00000453056 J3KTA2 159 aa13.62□□□□□ -0.23
VPS8-213ENST00000453056 UPK3AO75631 287 aa13.62□□□□□ -0.23
VPS8-213ENST00000453056 WNT11O96014 354 aa13.62□□□□□ -0.23
VPS8-213ENST00000453056 RHCEP18577 417 aa13.62□□□□□ -0.23
VPS8-213ENST00000453056 CDH2P19022 906 aaPredicted RBP13.62□□□□□ -0.23
VPS8-213ENST00000453056 FUT1P19526 365 aa13.62□□□□□ -0.23
VPS8-213ENST00000453056 LOXP28300 417 aaPredicted RBP13.62□□□□□ -0.23
VPS8-213ENST00000453056 ROR2Q01974 943 aaKnown RBP13.62□□□□□ -0.23
VPS8-213ENST00000453056 RRM2BQ7LG56 351 aa13.62□□□□□ -0.23
VPS8-213ENST00000453056 TMEM123Q8N131 208 aa13.62□□□□□ -0.23
VPS8-213ENST00000453056 ACOT11Q8WXI4 607 aaPredicted RBP13.62□□□□□ -0.23
VPS8-213ENST00000453056 ADAD1Q96M93 576 aaKnown RBP13.62□□□□□ -0.23
VPS8-213ENST00000453056 MUC13Q9H3R2 512 aa13.62□□□□□ -0.23
VPS8-213ENST00000453056 SLC17A5Q9NRA2 495 aa13.62□□□□□ -0.23
VPS8-213ENST00000453056 C20orf141Q9NUB4 165 aa13.62□□□□□ -0.23
VPS8-213ENST00000453056 MED29Q9NX70 200 aa13.62□□□□□ -0.23
VPS8-213ENST00000453056 RHCGQ9UBD6 479 aa13.62□□□□□ -0.23
VPS8-213ENST00000453056 ITGB1BP2Q9UKP3 347 aa13.62□□□□□ -0.23
VPS8-213ENST00000453056 PRPF19Q9UMS4 504 aaKnown RBP13.62□□□□□ -0.23
VPS8-213ENST00000453056 OTOGQ6ZRI0 2925 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 RAI1Q7Z5J4 1906 aaPredicted RBP13.61□□□□□ -0.23
VPS8-213ENST00000453056 A0A1W2PPR1 153 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 A0A1W2PRG6 482 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 SLC35F4A4IF30 521 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 MCIDASD6RGH6 385 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 BLOC1S5-TXNDC5H3BN57 136 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 CLOCKO15516 846 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 H1F0P07305 194 aaKnown RBP13.61□□□□□ -0.23
VPS8-213ENST00000453056 SAGP10523 405 aaPredicted RBP13.61□□□□□ -0.23
VPS8-213ENST00000453056 IFI30P13284 250 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 HLA-DOBP13765 273 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 IFNGR1P15260 489 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 PAX7P23759 505 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 CSNK1A1P48729 337 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 DAP3P51398 398 aaKnown RBP13.61□□□□□ -0.23
VPS8-213ENST00000453056 FOXG1P55316 489 aaPredicted RBP13.61□□□□□ -0.23
VPS8-213ENST00000453056 PRPS1P60891 318 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 UBE2NP61088 152 aaKnown RBP13.61□□□□□ -0.23
VPS8-213ENST00000453056 BSPH1Q075Z2 132 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 LGALS3BPQ08380 585 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 MTX3Q5HYI7 312 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 NCMAPQ5T1S8 102 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 CARD17Q5XLA6 110 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 SEZ6L2Q6UXD5 910 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 TMEM108Q6UXF1 575 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 SLC35D2Q76EJ3 337 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 LURAP1LQ8IV03 231 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 NRMQ8IXM6 262 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 C20orf196Q8IYI0 205 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 CDK20Q8IZL9 346 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 LRRC17Q8N6Y2 441 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 OR1K1Q8NGR3 316 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 OR6N1Q8NGY5 312 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 LIPHQ8WWY8 451 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 BPIFA2Q96DR5 249 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 PYURFQ96I23 114 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 LRR1Q96L50 414 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 NDEL1Q9GZM8 345 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 NMNAT1Q9HAN9 279 aaPredicted RBP13.61□□□□□ -0.23
VPS8-213ENST00000453056 MOV10Q9HCE1 1003 aaKnown RBP13.61□□□□□ -0.23
VPS8-213ENST00000453056 KRCC1Q9NPI7 259 aaPredicted RBP13.61□□□□□ -0.23
VPS8-213ENST00000453056 MAN2C1Q9NTJ4 1040 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 NDUFAF4Q9P032 175 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 STX18Q9P2W9 335 aaKnown RBP13.61□□□□□ -0.23
VPS8-213ENST00000453056 TMEM5Q9Y2B1 443 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 SLC25A15Q9Y619 301 aa13.61□□□□□ -0.23
VPS8-213ENST00000453056 A0A1W2PRQ8 180 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 RPL36A-HNRNPH2H7BZ11 118 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 M0R3G1 203 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 FFAR1O14842 300 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 PIP5K1CO60331 668 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 PRSS23O95084 383 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 ATE1O95260 518 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 STAMBPO95630 424 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 BCL10O95999 233 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 MSX2P35548 267 aaPredicted RBP13.6□□□□□ -0.23
VPS8-213ENST00000453056 ZNF83P51522 516 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 BIDP55957 195 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 SMIM11AP58511 58 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 RPL18Q07020 188 aaKnown RBP13.6□□□□□ -0.23
VPS8-213ENST00000453056 CAMK2DQ13557 499 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 DGCR6Q14129 220 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 TBRG1Q3YBR2 411 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 FGD3Q5JSP0 725 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 ANKRD16Q6P6B7 361 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 RNF113BQ8IZP6 322 aaKnown RBP13.6□□□□□ -0.23
VPS8-213ENST00000453056 OR6X1Q8NH79 312 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 MBD6Q96DN6 1003 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 RADILQ96JH8 1075 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 PIP5K1AQ99755 562 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 TMEM204Q9BSN7 226 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 EMC6Q9BV81 110 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 ULBP2Q9BZM5 246 aa13.6□□□□□ -0.23
VPS8-213ENST00000453056 LIME1Q9H400 295 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms