RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 DPY19L4Q7Z388 723 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 ZNF571Q7Z3V5 609 aaPredicted RBP3.62□□□□□ -1.83
LINC00393-202ENST00000452852 HSD11B1LQ7Z5J1 315 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 CTAGE6Q86UF2 777 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 ZFAND4Q86XD8 727 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 CATSPERDQ86XM0 798 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 LRRC49Q8IUZ0 686 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 SLC22A9Q8IVM8 553 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 UBQLNLQ8IYU4 475 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 RAB42Q8N4Z0 105 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 BHLHE23Q8NDY6 225 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 OR4D9Q8NGE8 314 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 OR10V1Q8NGI7 309 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 CCL4L1Q8NHW4 92 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 FBXO25Q8TCJ0 367 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 ART4Q93070 314 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 ANKRD27Q96NW4 1050 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 CATSPER2Q96P56 530 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 CSPG4P5Q96PW8 444 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 OR2M4Q96R27 311 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 BPIFA3Q9BQP9 254 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 DDA1Q9BW61 102 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 TBC1D10AQ9BXI6 508 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 MAGT1Q9H0U3 335 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 ADNPQ9H2P0 1102 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 GPN2Q9H9Y4 310 aaPredicted RBP3.62□□□□□ -1.83
LINC00393-202ENST00000452852 NT5MQ9NPB1 228 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 SLC39A1Q9NY26 324 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 TAS2R16Q9NYV7 291 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 KLHL8Q9P2G9 620 aaPredicted RBP3.62□□□□□ -1.83
LINC00393-202ENST00000452852 RCOR3Q9P2K3 495 aaPredicted RBP3.62□□□□□ -1.83
LINC00393-202ENST00000452852 CD84Q9UIB8 345 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 ANAPC7Q9UJX3 599 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 PPP1R3CQ9UQK1 317 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 SPACA6W5XKT8 324 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 PTPRQQ9UMZ3 2332 aa3.62□□□□□ -1.83
LINC00393-202ENST00000452852 SPENQ96T58 3664 aaKnown RBP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 ZFYVE26Q68DK2 2539 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 IGHV1OR21-1A0A087WYE8 117 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 C1orf232A0A0U1RR37 186 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 OR5K4A6NMS3 321 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 C15orf61A6NNL5 157 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 EFCAB7A8K855 629 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 ZNF724A8MTY0 619 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 GOLGA6L19H0YKK7 550 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 EI24O14681 340 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 CASKO14936 926 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 POLR1CO15160 346 aaPredicted RBP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 ZSCAN12O43309 604 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 MFSD11O43934 449 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 KLHL41O60662 606 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 RAD1O60671 282 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 SERPINA3P01011 423 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 TPM3P06753 285 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 KRT7P08729 469 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 PRSS56P0CW18 603 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 THRAP10827 490 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 CCL4P13236 92 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 CD1DP15813 335 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 ANOS1P23352 680 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 CD1CP29017 333 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 ZFP36L2P47974 494 aaKnown RBP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 STC1P52823 247 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 RPL26P61254 145 aaKnown RBP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 DHODHQ02127 395 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 GBE1Q04446 702 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 ZP4Q12836 540 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 SRSF6Q13247 344 aaKnown RBP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 PDK2Q15119 407 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 TATDN3Q17R31 274 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 PYCR3Q53H96 274 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 KCTD16Q68DU8 428 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 APTXQ7Z2E3 356 aaKnown RBP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 NET1Q7Z628 596 aaPredicted RBP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 KIAA1328Q86T90 577 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 RANBP3LQ86VV4 465 aaPredicted RBP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 SLC38A6Q8IZM9 456 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 ANKFN1Q8N957 763 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 TRMT10AQ8TBZ6 339 aaKnown RBP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 ZNF564Q8TBZ8 553 aaPredicted RBP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 SLC37A2Q8TED4 501 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 SPRYD4Q8WW59 207 aaPredicted RBP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 PATE1Q8WXA2 126 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 ADIPOR1Q96A54 375 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 CNRIP1Q96F85 164 aaPredicted RBP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 TNFRSF13CQ96RJ3 184 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 MCCC1Q96RQ3 725 aaPredicted RBP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 NPAS2Q99743 824 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 SYT11Q9BT88 431 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 RIOK2Q9BVS4 552 aaKnown RBP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 TRIM4Q9C037 500 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 HOXD1Q9GZZ0 328 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 MED20Q9H944 212 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 IL1RAPQ9NPH3 570 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 RBM22Q9NW64 420 aaKnown RBP eCLIP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 UTP6Q9NYH9 597 aaKnown RBP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 MBD2Q9UBB5 411 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 EIF3KQ9UBQ5 218 aaKnown RBP3.61□□□□□ -1.83
LINC00393-202ENST00000452852 LCMT1Q9UIC8 334 aa3.61□□□□□ -1.83
LINC00393-202ENST00000452852 LNPEPQ9UIQ6 1025 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms