RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 ZNF525Q8N782 197 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 FAM169BQ8N8A8 192 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 OR10H5Q8NGA6 315 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 OR6T1Q8NGN1 323 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 FAM168AQ92567 244 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 MOGAT1Q96PD6 335 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 ARHGDIGQ99819 225 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 SH3GL1Q99961 368 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 EMC6Q9BV81 110 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 NELFAQ9H3P2 528 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 B3GAT2Q9NPZ5 323 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 CA10Q9NS85 328 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 MRGBPQ9NV56 204 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 MRPL39Q9NYK5 338 aaKnown RBP11.22□□□□□ -0.61
CHD3-206ENST00000452447 CRNNQ9UBG3 495 aaPredicted RBP11.22□□□□□ -0.61
CHD3-206ENST00000452447 COL6A5A8TX70 2615 aa11.22□□□□□ -0.61
CHD3-206ENST00000452447 SLC35F4A4IF30 521 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 CPSF4LA6NMK7 179 aaKnown RBP11.21□□□□□ -0.61
CHD3-206ENST00000452447 VSTM5A8MXK1 200 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 ZNF99A8MXY4 864 aaPredicted RBP11.21□□□□□ -0.61
CHD3-206ENST00000452447 CHP2O43745 196 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 TLX2O43763 284 aaPredicted RBP11.21□□□□□ -0.61
CHD3-206ENST00000452447 SERPINI2O75830 405 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 OR6A2O95222 327 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 HPRP00739 348 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 MT-ATP6P00846 226 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 IGKV3-15P01624 115 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 VIMP08670 466 aaKnown RBP11.21□□□□□ -0.61
CHD3-206ENST00000452447 CECR9P0C854 216 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 TROVE2P10155 538 aaKnown RBP eCLIP11.21□□□□□ -0.61
CHD3-206ENST00000452447 CBR1P16152 277 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 ARR3P36575 388 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 NPRL3Q12980 569 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 SWI5Q1ZZU3 235 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 MMEL1Q495T6 779 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 ENTPD8Q5MY95 495 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 SNX32Q86XE0 403 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 PRIMA1Q86XR5 153 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 CCDC36Q8IYA8 594 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 C20orf196Q8IYI0 205 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 GPR32P1Q8NGA4 272 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 OR4F15Q8NGB8 312 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 VANGL1Q8TAA9 524 aaPredicted RBP11.21□□□□□ -0.61
CHD3-206ENST00000452447 RASSF5Q8WWW0 418 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 ZNF837Q96EG3 531 aaPredicted RBP11.21□□□□□ -0.61
CHD3-206ENST00000452447 LRR1Q96L50 414 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 TMEM120AQ9BXJ8 343 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 YAE1D1Q9NRH1 226 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 MED29Q9NX70 200 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 FKBP7Q9Y680 259 aa11.21□□□□□ -0.61
CHD3-206ENST00000452447 MALRD1Q5VYJ5 2156 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 B9A039 149 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 LRRN3E7EW58 273 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 CD5LO43866 347 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 CRLF1O75462 422 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 SEC14L2O76054 403 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 F12P00748 615 aaPredicted RBP11.2□□□□□ -0.62
CHD3-206ENST00000452447 IGLV1-44P01699 117 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 CSF3P09919 207 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 OR4A8P0C604 315 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 ADORA3P0DMS8 318 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 SLC25A16P16260 332 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 PCGF2P35227 344 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 IDH3GP51553 393 aaPredicted RBP11.2□□□□□ -0.62
CHD3-206ENST00000452447 CAMK2DQ13557 499 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 MST1LQ2TV78 715 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 TRMT5Q32P41 509 aaKnown RBP11.2□□□□□ -0.62
CHD3-206ENST00000452447 NANOGP8Q6NSW7 305 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 TTC33Q6PID6 262 aaPredicted RBP11.2□□□□□ -0.62
CHD3-206ENST00000452447 SLC46A3Q7Z3Q1 461 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 PXKQ7Z7A4 578 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 OR6N1Q8NGY5 312 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 OR5J2Q8NH18 312 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 ADAMTS16Q8TE57 1224 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 TXNDC15Q96J42 360 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 VRK1Q99986 396 aaPredicted RBP11.2□□□□□ -0.62
CHD3-206ENST00000452447 ECSITQ9BQ95 431 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 NANOGQ9H9S0 305 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 USP22Q9UPT9 525 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 TRAPPC13A5PLN9 417 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 C11orf98E9PRG8 122 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 PLPP3O14495 311 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 GPRIN2O60269 458 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 PDE5AO76074 875 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 CELA3BP08861 270 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 CD247P20963 164 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 ARFIP2P53365 341 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 NPTX1Q15818 432 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 VMACQ2NL98 169 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 PHYHD1Q5SRE7 291 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 LINC00114Q6XXX2 140 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 RBM45Q8IUH3 476 aaKnown RBP11.2□□□□□ -0.62
CHD3-206ENST00000452447 IL17RDQ8NFM7 739 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 PROX1Q92786 737 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 TAMM41Q96BW9 452 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 LRRC58Q96CX6 371 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 MPP4Q96JB8 637 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 TNFRSF13CQ96RJ3 184 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 ULBP2Q9BZM5 246 aa11.2□□□□□ -0.62
CHD3-206ENST00000452447 NANSQ9NR45 359 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms