RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 LINC00470Q9BZP3 86 aa8.45□□□□□ -1.06
USP54-207ENST00000451492 NELFAQ9H3P2 528 aa8.45□□□□□ -1.06
USP54-207ENST00000451492 EVA1AQ9H8M9 152 aa8.45□□□□□ -1.06
USP54-207ENST00000451492 GID8Q9NWU2 228 aa8.45□□□□□ -1.06
USP54-207ENST00000451492 PRDM4Q9UKN5 801 aa8.45□□□□□ -1.06
USP54-207ENST00000451492 RCE1Q9Y256 329 aa8.45□□□□□ -1.06
USP54-207ENST00000451492 B3GALT5Q9Y2C3 310 aa8.45□□□□□ -1.06
USP54-207ENST00000451492 CORINQ9Y5Q5 1042 aa8.45□□□□□ -1.06
USP54-207ENST00000451492 TRAPPC13A5PLN9 417 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 ZNF503-AS2A6NEH8 195 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 FAM220BPB1ANY3 271 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 RNF13O43567 381 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 PIP5K1CO60331 668 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 FMO6PO60774 539 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 LY6HO94772 140 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 ZNF432O94892 652 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 LYPD3O95274 346 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 C8BP07358 591 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 CECR9P0C854 216 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 CD79AP11912 226 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 B4GALT1P15291 398 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 PAX1P15863 534 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 HOXB4P17483 251 aaPredicted RBP8.44□□□□□ -1.06
USP54-207ENST00000451492 MDH1P40925 334 aaKnown RBP8.44□□□□□ -1.06
USP54-207ENST00000451492 IDH3GP51553 393 aaPredicted RBP8.44□□□□□ -1.06
USP54-207ENST00000451492 BIDP55957 195 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 MFSD13AQ14CX5 517 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 SWT1Q5T5J6 900 aaKnown RBP8.44□□□□□ -1.06
USP54-207ENST00000451492 C11orf71Q6IPW1 123 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 ANKRD16Q6P6B7 361 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 DTX2Q86UW9 622 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 CALHM3Q86XJ0 350 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 NKAIN4Q8IVV8 208 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 TMEM123Q8N131 208 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 LRRC17Q8N6Y2 441 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 ADPRHL1Q8NDY3 354 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 OR2T12Q8NG77 320 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 OR6N1Q8NGY5 312 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 BCL2L2Q92843 193 aaPredicted RBP8.44□□□□□ -1.06
USP54-207ENST00000451492 ADAD1Q96M93 576 aaKnown RBP8.44□□□□□ -1.06
USP54-207ENST00000451492 ZNF583Q96ND8 569 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 ULBP2Q9BZM5 246 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 MED4Q9NPJ6 270 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 B3GAT2Q9NPZ5 323 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 NANSQ9NR45 359 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 CBLN4Q9NTU7 201 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 MRGBPQ9NV56 204 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 MRPL39Q9NYK5 338 aaKnown RBP8.44□□□□□ -1.06
USP54-207ENST00000451492 NIPBLQ6KC79 2804 aaeCLIP8.44□□□□□ -1.06
USP54-207ENST00000451492 ZANQ9Y493 2812 aa8.44□□□□□ -1.06
USP54-207ENST00000451492 SETD2Q9BYW2 2564 aaPredicted RBP8.44□□□□□ -1.06
USP54-207ENST00000451492 CHD3Q12873 2000 aaKnown RBP8.44□□□□□ -1.06
USP54-207ENST00000451492 ZNF726A6NNF4 738 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 INAFM1C9JVW0 142 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 BLOC1S5-TXNDC5H3BN57 136 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 PLPP3O14495 311 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 TMCC2O75069 709 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 FZD7O75084 574 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 MT-ATP6P00846 226 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 CRYAAP02489 173 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 COX4I1P13073 169 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 IFNGR1P15260 489 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 CALCRP30988 508 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 YAP1P46937 504 aaKnown RBP8.43□□□□□ -1.06
USP54-207ENST00000451492 CSNK1A1P48729 337 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 UGT2B15P54855 530 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 SH3BGRP55822 239 aaPredicted RBP8.43□□□□□ -1.06
USP54-207ENST00000451492 PIGFQ07326 219 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 RAB35Q15286 201 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 ZNF74Q16587 644 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 CYBRD1Q53TN4 286 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 COQ5Q5HYK3 327 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 ERICH5Q6P6B1 374 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 ZNF813Q6ZN06 617 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 SLC35D2Q76EJ3 337 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 CCDC80Q76M96 950 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 NANOGNBQ7Z5D8 188 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 MDP1Q86V88 176 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 C20orf196Q8IYI0 205 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 MICU2Q8IYU8 434 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 SCAIQ8N9R8 606 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 TMEM255BQ8WV15 326 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 CCDC134Q9H6E4 229 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 RHCGQ9UBD6 479 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 BAG5Q9UL15 447 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 POFUT2Q9Y2G5 429 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 NOX1Q9Y5S8 564 aa8.43□□□□□ -1.06
USP54-207ENST00000451492 IGHV4-30-2A0A087WSY4 118 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 ARPC4-TTLL3A0A0A6YYG9 625 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 ELOVL7A1L3X0 281 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 FAM171A2A8MVW0 826 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 ZNF99A8MXY4 864 aaPredicted RBP8.42□□□□□ -1.06
USP54-207ENST00000451492 MCIDASD6RGH6 385 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 RPL36A-HNRNPH2H7BZ11 118 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 GSTA4O15217 222 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 ZNF682O95780 498 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 HLA-HP01893 362 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 HIST1H2ABP04908 130 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 F13BP05160 661 aa8.42□□□□□ -1.06
USP54-207ENST00000451492 FUT1P19526 365 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms