RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 SPERTQ8NA61 448 aa6.57□□□□□ -1.36
LINC01961-201ENST00000449954 Q8NFD4 153 aa6.57□□□□□ -1.36
LINC01961-201ENST00000449954 R3HDM4Q96D70 268 aa6.57□□□□□ -1.36
LINC01961-201ENST00000449954 EAF1Q96JC9 268 aaPredicted RBP6.57□□□□□ -1.36
LINC01961-201ENST00000449954 THUMPD3Q9BV44 507 aaKnown RBP6.57□□□□□ -1.36
LINC01961-201ENST00000449954 CCDC106Q9BWC9 280 aa6.57□□□□□ -1.36
LINC01961-201ENST00000449954 ACTRT3Q9BYD9 372 aa6.57□□□□□ -1.36
LINC01961-201ENST00000449954 DUSP22Q9NRW4 184 aa6.57□□□□□ -1.36
LINC01961-201ENST00000449954 FARSBQ9NSD9 589 aaKnown RBP6.57□□□□□ -1.36
LINC01961-201ENST00000449954 TXNDC16Q9P2K2 825 aa6.57□□□□□ -1.36
LINC01961-201ENST00000449954 FBXL3Q9UKT7 428 aa6.57□□□□□ -1.36
LINC01961-201ENST00000449954 PCDHGB4Q9UN71 923 aa6.57□□□□□ -1.36
LINC01961-201ENST00000449954 CHMP2BQ9UQN3 213 aa6.57□□□□□ -1.36
LINC01961-201ENST00000449954 MTO1Q9Y2Z2 717 aaKnown RBP6.57□□□□□ -1.36
LINC01961-201ENST00000449954 GPR45Q9Y5Y3 372 aa6.57□□□□□ -1.36
LINC01961-201ENST00000449954 NPTNQ9Y639 398 aa6.57□□□□□ -1.36
LINC01961-201ENST00000449954 USH1CQ9Y6N9 552 aa6.57□□□□□ -1.36
LINC01961-201ENST00000449954 TANC2Q9HCD6 1990 aa6.57□□□□□ -1.36
LINC01961-201ENST00000449954 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 BTBD17A6NE02 478 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 NPIPB6E9PJ23 425 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 RNASEK-C17orf49H0YIS7 233 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 PSPNO60542 156 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 DUS4LO95620 317 aaKnown RBP6.56□□□□□ -1.36
LINC01961-201ENST00000449954 OR12D1P0DN82 309 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 ZNF250P15622 560 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 IGLL1P15814 213 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 TSPAN8P19075 237 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 MAKP20794 623 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 ELK3P41970 407 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 IER3P46695 156 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 SELENOPP49908 381 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 RAE1P78406 368 aaKnown RBP6.56□□□□□ -1.36
LINC01961-201ENST00000449954 ARF1P84077 181 aaKnown RBP6.56□□□□□ -1.36
LINC01961-201ENST00000449954 ACSM2AQ08AH3 577 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 HSPB3Q12988 150 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 PRAMEF8Q5VWM4 474 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 PRAMEF7Q5VXH5 474 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 ACSM2BQ68CK6 577 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 CLEC6AQ6EIG7 209 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 TTC27Q6P3X3 843 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 RAPH1Q70E73 1250 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 LINGO2Q7L985 606 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 RNF144BQ7Z419 303 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 GRINAQ7Z429 371 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 C11orf44Q8N8P7 122 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 WFDC9Q8NEX5 89 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 SYNPRQ8TBG9 265 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 RAB40AQ8WXH6 277 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 PMM1Q92871 262 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 DDIT4LQ96D03 193 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 ZG16BQ96DA0 208 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 NEURL3Q96EH8 262 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 DNAJA3Q96EY1 480 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 GIMAP5Q96F15 307 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 STACQ99469 402 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 SSBP3Q9BWW4 388 aaPredicted RBP6.56□□□□□ -1.36
LINC01961-201ENST00000449954 TRIM15Q9C019 465 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 OR11A1Q9GZK7 315 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 EGLN1Q9GZT9 426 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 MMP28Q9H239 520 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 NANOGQ9H9S0 305 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 CTPS2Q9NRF8 586 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 ACOXLQ9NUZ1 547 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 GIN1Q9NXP7 522 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 B3GNT2Q9NY97 397 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 TEX264Q9Y6I9 313 aa6.56□□□□□ -1.36
LINC01961-201ENST00000449954 AQP7P3A6NL99 342 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 NPIPB9F8W1W9 429 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 GOLGA6L22H0YM25 854 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 TM9SF1O15321 606 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 VAMP5O95183 116 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 CLPTM1O96005 669 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 OTCP00480 354 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 ANXA4P09525 319 aaPredicted RBP6.55□□□□□ -1.36
LINC01961-201ENST00000449954 SBK2P0C263 348 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 LMO1P25800 156 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 ZNF81P51508 661 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 MAP2K6P52564 334 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 PRKAG1P54619 331 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 SLC35A2P78381 396 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 EGFEM1PQ0D2K5 195 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 DLG1Q12959 904 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 PDE7AQ13946 482 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 TSTQ16762 297 aaKnown RBP6.55□□□□□ -1.36
LINC01961-201ENST00000449954 ATP6AP1LQ52LC2 224 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 CDC73Q6P1J9 531 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 NIPAL3Q6P499 406 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 C6orf89Q6UWU4 347 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 CCDC91Q7Z6B0 441 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 GPAT4Q86UL3 456 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 NDUFA11Q86Y39 141 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 PAPD5Q8NDF8 572 aaKnown RBP6.55□□□□□ -1.36
LINC01961-201ENST00000449954 OR4F6Q8NGB9 312 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 ZFP28Q8NHY6 868 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 DCAKDQ8WVC6 231 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 DACT3Q96B18 629 aaPredicted RBP6.55□□□□□ -1.36
LINC01961-201ENST00000449954 RCC1LQ96I51 464 aaKnown RBP6.55□□□□□ -1.36
LINC01961-201ENST00000449954 VPREB3Q9UKI3 123 aa6.55□□□□□ -1.36
LINC01961-201ENST00000449954 KIR2DS1A0A191URI9 304 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms