RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 SURF4O15260 269 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 PRKYO43930 277 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 AQP8O94778 261 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 VAMP5O95183 116 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 HMGN1P05114 100 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 ACADSP16219 412 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 HIST1H1CP16403 213 aaKnown RBP13.05□□□□□ -0.32
TNF-208ENST00000449264 MYF6P23409 242 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 SDHAP31040 664 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 PCYT1AP49585 367 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 DAP3P51398 398 aaKnown RBP13.05□□□□□ -0.32
TNF-208ENST00000449264 MED21Q13503 144 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 KRR1Q13601 381 aaKnown RBP13.05□□□□□ -0.32
TNF-208ENST00000449264 PTCHD4Q6ZW05 846 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 SLC35D2Q76EJ3 337 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 CD163Q86VB7 1156 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 JAZF1Q86VZ6 243 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 ENTHD1Q8IYW4 607 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 SDR9C7Q8NEX9 313 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 OR9K2Q8NGE7 335 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 OR52E2Q8NGJ4 325 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 OTULINQ96BN8 352 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 TRIB1Q96RU8 372 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 TXNIPQ9H3M7 391 aa13.05□□□□□ -0.32
TNF-208ENST00000449264 ZNF346Q9UL40 294 aaKnown RBP13.05□□□□□ -0.32
TNF-208ENST00000449264 SMG1Q96Q15 3661 aaKnown RBP13.04□□□□□ -0.32
TNF-208ENST00000449264 SHANK1Q9Y566 2161 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 SLC22A20A6NK97 555 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 H7C1C5 153 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 ARPC3O15145 178 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 DENRO43583 198 aaKnown RBP13.04□□□□□ -0.32
TNF-208ENST00000449264 TRAF3IP2O43734 574 aaPredicted RBP13.04□□□□□ -0.32
TNF-208ENST00000449264 TLX2O43763 284 aaPredicted RBP13.04□□□□□ -0.32
TNF-208ENST00000449264 CYTIPO60759 359 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 BCL10O95999 233 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 IFNGP01579 166 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 IGHMP01871 453 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 ZNF3P17036 446 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 ACVR1BP36896 505 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 RPL27P61353 136 aaKnown RBP13.04□□□□□ -0.32
TNF-208ENST00000449264 LCN6P62502 163 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.04□□□□□ -0.32
TNF-208ENST00000449264 RASGEF1BQ0VAM2 473 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 SLC17A1Q14916 467 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 MESTQ5EB52 335 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 P4HA3Q7Z4N8 544 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 THAP5Q7Z6K1 395 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 CYB561A3Q8NBI2 242 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 CNIH3Q8TBE1 160 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 RNF128Q8TEB7 428 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 ZNF775Q96BV0 537 aaPredicted RBP13.04□□□□□ -0.32
TNF-208ENST00000449264 WBP1Q96G27 269 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 TXNDC15Q96J42 360 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 EMC6Q9BV81 110 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 FANCFQ9NPI8 374 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 CMC2Q9NRP2 79 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 ZNF226Q9NYT6 803 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 PCDHGB5Q9Y5G0 923 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 NBASA2RRP1 2371 aa13.04□□□□□ -0.32
TNF-208ENST00000449264 FAM183AA6NL82 134 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 XKRYO14609 159 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 ARHGEF9O43307 516 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 TGM6O95932 706 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 APEHP13798 732 aaKnown RBP13.03□□□□□ -0.32
TNF-208ENST00000449264 BIDP55957 195 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 CLDN17P56750 224 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 ISL1P61371 349 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 CD47Q08722 323 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 CRMP1Q14194 572 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 MAD2L1BPQ15013 274 aaPredicted RBP13.03□□□□□ -0.32
TNF-208ENST00000449264 POU4F3Q15319 338 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 ACSF3Q4G176 576 aaPredicted RBP13.03□□□□□ -0.32
TNF-208ENST00000449264 GPR139Q6DWJ6 353 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 CPT1CQ8TCG5 803 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 ZPLD1Q8TCW7 415 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 ASB10Q8WXI3 467 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 NMNAT3Q96T66 252 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 FN3KQ9H479 309 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 CLEC4AQ9UMR7 237 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 LRCH1Q9Y2L9 728 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 DOCK7Q96N67 2140 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 ARHGAP21Q5T5U3 1957 aa13.03□□□□□ -0.32
TNF-208ENST00000449264 ZNF716A6NP11 495 aa13.02□□□□□ -0.32
TNF-208ENST00000449264 IDH3BO43837 385 aa13.02□□□□□ -0.32
TNF-208ENST00000449264 FCGR2AP12318 317 aa13.02□□□□□ -0.32
TNF-208ENST00000449264 DBPQ10586 325 aaPredicted RBP13.02□□□□□ -0.32
TNF-208ENST00000449264 PDK3Q15120 406 aa13.02□□□□□ -0.32
TNF-208ENST00000449264 EMC4Q5J8M3 183 aa13.02□□□□□ -0.32
TNF-208ENST00000449264 LEG1Q6P5S2 330 aa13.02□□□□□ -0.32
TNF-208ENST00000449264 CREB3L2Q70SY1 520 aa13.02□□□□□ -0.32
TNF-208ENST00000449264 BCDIN3DQ7Z5W3 292 aaKnown RBP13.02□□□□□ -0.32
TNF-208ENST00000449264 WDFY1Q8IWB7 410 aa13.02□□□□□ -0.32
TNF-208ENST00000449264 MCEMP1Q8IX19 187 aa13.02□□□□□ -0.32
TNF-208ENST00000449264 MARVELD2Q8N4S9 558 aa13.02□□□□□ -0.32
TNF-208ENST00000449264 ARIH2OSQ8N7S6 290 aa13.02□□□□□ -0.32
TNF-208ENST00000449264 OR8J1Q8NGP2 316 aa13.02□□□□□ -0.32
TNF-208ENST00000449264 ZNF519Q8TB69 540 aa13.02□□□□□ -0.32
TNF-208ENST00000449264 TMEM163Q8TC26 289 aa13.02□□□□□ -0.32
TNF-208ENST00000449264 ZNF385AQ96PM9 386 aaKnown RBP13.02□□□□□ -0.32
TNF-208ENST00000449264 SF3B5Q9BWJ5 86 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms