RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ACSF3Q4G176 576 aaPredicted RBP12.52□□□□□ -0.4
SHMT2-203ENST00000449049 GPR139Q6DWJ6 353 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 OR9K2Q8NGE7 335 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 TEX12Q9BXU0 123 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 FAM192AQ9GZU8 254 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 ING1Q9UK53 422 aaPredicted RBP12.52□□□□□ -0.4
SHMT2-203ENST00000449049 ZNF346Q9UL40 294 aaKnown RBP12.52□□□□□ -0.4
SHMT2-203ENST00000449049 ZNF407Q9C0G0 2248 aa12.52□□□□□ -0.4
SHMT2-203ENST00000449049 DSPP15924 2871 aaKnown RBP12.52□□□□□ -0.41
SHMT2-203ENST00000449049 IGKV3D-15A0A087WSY6 115 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 CLIC3O95833 236 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 GNAO1P09471 354 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 ZNF43P17038 809 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 DAP3P51398 398 aaKnown RBP12.52□□□□□ -0.41
SHMT2-203ENST00000449049 CDC42P60953 191 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 RPL27P61353 136 aaKnown RBP12.52□□□□□ -0.41
SHMT2-203ENST00000449049 RASGEF1BQ0VAM2 473 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 DYNC1I2Q13409 638 aaKnown RBP12.52□□□□□ -0.41
SHMT2-203ENST00000449049 FOXB2Q5VYV0 432 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 ZNF585AQ6P3V2 769 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 PLXDC2Q6UX71 529 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 CREB3L2Q70SY1 520 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 SLC35D2Q76EJ3 337 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 CD163Q86VB7 1156 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 ST6GALNAC3Q8NDV1 305 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 ZNF519Q8TB69 540 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 FAM81AQ8TBF8 368 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 ABHD3Q8WU67 409 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 TRIB1Q96RU8 372 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 PRRG3Q9BZD7 231 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 CALHM2Q9HA72 323 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 GRHPRQ9UBQ7 328 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 ITPR1Q14643 2758 aa12.52□□□□□ -0.41
SHMT2-203ENST00000449049 CD8B2A6NJW9 211 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 FIGNL2A6NMB9 653 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 KDM4EB2RXH2 506 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-203ENST00000449049 SURF4O15260 269 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 DENRO43583 198 aaKnown RBP12.51□□□□□ -0.41
SHMT2-203ENST00000449049 SERPINI2O75830 405 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 TGM6O95932 706 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 IFNGR1P15260 489 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 EFNB1P98172 346 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 TOP3AQ13472 1001 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-203ENST00000449049 C1DQ13901 141 aaKnown RBP12.51□□□□□ -0.41
SHMT2-203ENST00000449049 RNPS1Q15287 305 aaKnown RBP12.51□□□□□ -0.41
SHMT2-203ENST00000449049 ZNF362Q5T0B9 420 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-203ENST00000449049 ARMC4Q5T2S8 1044 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 CASP12Q6UXS9 341 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 ZIC4Q8N9L1 334 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 ASB10Q8WXI3 467 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 RASD2Q96D21 266 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 Q96M85 177 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 MUS81Q96NY9 551 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 SLC38A2Q96QD8 506 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 APOL4Q9BPW4 351 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 PRRG4Q9BZD6 226 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 Q9H521 79 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 RNF122Q9H9V4 155 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 BCO1Q9HAY6 547 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 CMC2Q9NRP2 79 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 TVP23BQ9NYZ1 205 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 KLHL9Q9P2J3 617 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 FLVCR1Q9Y5Y0 555 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 USP24Q9UPU5 2620 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 BOD1L1Q8NFC6 3051 aa12.51□□□□□ -0.41
SHMT2-203ENST00000449049 TEX13CA0A0J9YWL9 993 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 HOXD4P09016 255 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-203ENST00000449049 NOS3P29474 1203 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 RBPJQ06330 500 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 MELKQ14680 651 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 MESTQ5EB52 335 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 SLC35F1Q5T1Q4 408 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 FAM205BPQ63HN1 556 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 NSUN5P2Q63ZY6 315 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 DEPDC4Q8N2C3 294 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 ARIH2OSQ8N7S6 290 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 SETD9Q8NE22 299 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 WNT2BQ93097 391 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 TXNDC15Q96J42 360 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 GP6Q9HCN6 339 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 MED29Q9NX70 200 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 HSPE1-MOB4S4R3N1 261 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 PRRG2O14669 202 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 SLC19A2O60779 497 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 BCL10O95999 233 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 HIST1H1CP16403 213 aaKnown RBP12.5□□□□□ -0.41
SHMT2-203ENST00000449049 MYF6P23409 242 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 ACVR2AP27037 513 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 PCYT1AP49585 367 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 ISL1P61371 349 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 KRR1Q13601 381 aaKnown RBP12.5□□□□□ -0.41
SHMT2-203ENST00000449049 SNAPC1Q16533 368 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 C1orf185Q5T7R7 199 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 EEF1A1P5Q5VTE0 462 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 GTF2IRD2BQ6EKJ0 949 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 RTL6Q6ICC9 239 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 GTF2IRD2Q86UP8 949 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 ENTHD1Q8IYW4 607 aa12.5□□□□□ -0.41
SHMT2-203ENST00000449049 C8orf59Q8N0T1 100 aaPredicted RBP12.5□□□□□ -0.41
SHMT2-203ENST00000449049 TRUB1Q8WWH5 349 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms