RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 MUCL1Q96DR8 90 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 PRSS27Q9BQR3 290 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 ZNF426Q9BUY5 554 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 AMBRA1Q9C0C7 1298 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 FKRPQ9H9S5 495 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 NGBQ9NPG2 151 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 NANSQ9NR45 359 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 MRPL39Q9NYK5 338 aaKnown RBP12.82□□□□□ -0.36
USP39-206ENST00000448971 SAMD4AQ9UPU9 718 aaKnown RBP12.82□□□□□ -0.36
USP39-206ENST00000448971 RCE1Q9Y256 329 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 V9GYQ6 96 aa12.82□□□□□ -0.36
USP39-206ENST00000448971 OR6C65A6NJZ3 312 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 OR5H1A6NKK0 313 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 C11orf98E9PRG8 122 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 J3KTA2 159 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 ARHGEF9O43307 516 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 TRAF3IP2O43734 574 aaPredicted RBP12.81□□□□□ -0.36
USP39-206ENST00000448971 SLC43A1O75387 559 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 THRBP10828 461 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 HSD17B1P14061 328 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 CDH2P19022 906 aaPredicted RBP12.81□□□□□ -0.36
USP39-206ENST00000448971 CALB2P22676 271 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 FOXG1P55316 489 aaPredicted RBP12.81□□□□□ -0.36
USP39-206ENST00000448971 TGFBR3Q03167 851 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 TIMM23BQ5SRD1 257 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 CYP4Z1Q86W10 505 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 OFCC1Q8IZS5 231 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 LRRC75A-AS1Q8N1F1 130 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 OR52N5Q8NH56 324 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 HSD17B8Q92506 261 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 PLPPR2Q96GM1 343 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 CDRT15Q96T59 188 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 PIP5K1AQ99755 562 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 FNDC11Q9BVV2 318 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 UBTD1Q9HAC8 227 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 RHCGQ9UBD6 479 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 ZNF229Q9UJW7 825 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 A4GNTQ9UNA3 340 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 MED31Q9Y3C7 131 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 USF3Q68DE3 2245 aa12.81□□□□□ -0.36
USP39-206ENST00000448971 ANK3Q12955 4377 aaKnown RBP12.81□□□□□ -0.36
USP39-206ENST00000448971 B2RBV5 119 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 ARPC2O15144 300 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 PIP5K1CO60331 668 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 HPRP00739 348 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 MT-ND1P03886 318 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 HIST1H2ABP04908 130 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 MPGP29372 298 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 LGALS3BPQ08380 585 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 Q5PR19 223 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 CARD17Q5XLA6 110 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 OR7E24Q6IFN5 339 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 KLHL24Q6TFL4 600 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 HIST3H2AQ7L7L0 130 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 GPR137CQ8N3F9 429 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 PIK3C3Q8NEB9 887 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 HIST1H2ACQ93077 130 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 SGTBQ96EQ0 304 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 NSL1Q96IY1 281 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 NSMCE2Q96MF7 247 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 HS6ST2Q96MM7 605 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 MEPEQ9NQ76 525 aaPredicted RBP12.8□□□□□ -0.36
USP39-206ENST00000448971 MED29Q9NX70 200 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 NOX1Q9Y5S8 564 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 SNX13Q9Y5W8 968 aa12.8□□□□□ -0.36
USP39-206ENST00000448971 A0A1W2PR80 420 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 MS4A18H0YCH9 400 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 H7C1Q1 480 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 PDLIM1O00151 329 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 PLPP3O14495 311 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 KLF4O43474 513 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 RNF13O43567 381 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 UPK3AO75631 287 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 HLA-DOBP13765 273 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 TRAM2Q15035 370 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 MS4A18Q3C1V0 323 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 HMBOX1Q6NT76 420 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 PRSS57Q6UWY2 283 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 ZNF704Q6ZNC4 412 aaPredicted RBP12.79□□□□□ -0.36
USP39-206ENST00000448971 SSX8Q7RTT4 187 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 SLC46A3Q7Z3Q1 461 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 P2RY8Q86VZ1 359 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 C17orf78Q8N4C9 275 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 LRRC17Q8N6Y2 441 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 C1orf162Q8NEQ5 155 aaPredicted RBP12.79□□□□□ -0.36
USP39-206ENST00000448971 LINC00470Q9BZP3 86 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 ESRP2Q9H6T0 727 aaKnown RBP12.79□□□□□ -0.36
USP39-206ENST00000448971 C20orf141Q9NUB4 165 aa12.79□□□□□ -0.36
USP39-206ENST00000448971 DCAF13Q9NV06 445 aaKnown RBP12.79□□□□□ -0.36
USP39-206ENST00000448971 LOC102725191A0A1B0GVB3 256 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 ZNF726A6NNF4 738 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 BLOC1S5-TXNDC5H3BN57 136 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 hCG_2039718K7EN88 272 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 CLOCKO15516 846 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 OR7A10O76100 309 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 CD3EP07766 207 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 ASAH2BP0C7U1 165 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 IFI30P13284 250 aa12.78□□□□□ -0.36
USP39-206ENST00000448971 MSX2P35548 267 aaPredicted RBP12.78□□□□□ -0.36
USP39-206ENST00000448971 ROR2Q01974 943 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms