RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 ZNF234Q14588 700 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 PRPF38BQ5VTL8 546 aaKnown RBP17.59■□□□□ 0.41
HMGA1-205ENST00000447654 FCRLAQ7L513 359 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 BAP18Q8IXM2 172 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 KISS1RQ969F8 398 aaPredicted RBP17.59■□□□□ 0.41
HMGA1-205ENST00000447654 MEGF10Q96KG7 1140 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 TDP1Q9NUW8 608 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 CD84Q9UIB8 345 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 LHX6Q9UPM6 363 aa17.59■□□□□ 0.41
HMGA1-205ENST00000447654 MTCL1Q9Y4B5 1905 aaKnown RBP17.58■□□□□ 0.4
HMGA1-205ENST00000447654 IGLV3-16A0A075B6K0 115 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 GXYLT2A0PJZ3 443 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 TSTD3H0UI37 97 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 RNASEK-C17orf49H0YIS7 233 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 J3QLW9 94 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 NPC1O15118 1278 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 GLSO94925 669 aaPredicted RBP17.58■□□□□ 0.4
HMGA1-205ENST00000447654 CD5P06127 495 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 CD14P08571 375 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 ZNF19P17023 458 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 MAPK8P45983 427 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 UBE2MP61081 183 aaKnown RBP17.58■□□□□ 0.4
HMGA1-205ENST00000447654 SNRPD1P62314 119 aaKnown RBP17.58■□□□□ 0.4
HMGA1-205ENST00000447654 RPS26P62854 115 aaKnown RBP17.58■□□□□ 0.4
HMGA1-205ENST00000447654 ADIPOR2Q86V24 386 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 COMTD1Q86VU5 262 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 OR6X1Q8NH79 312 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 RAB8BQ92930 207 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 FBXO17Q96EF6 278 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 DERL3Q96Q80 235 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 ZNF426Q9BUY5 554 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 KCNK12Q9HB15 430 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 MRPS30Q9NP92 439 aaKnown RBP17.58■□□□□ 0.4
HMGA1-205ENST00000447654 IL23AQ9NPF7 189 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 HAO2Q9NYQ3 351 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 ZNF337Q9Y3M9 751 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 PCDHGA1Q9Y5H4 931 aa17.58■□□□□ 0.4
HMGA1-205ENST00000447654 CLDN4O14493 209 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 COX5BP10606 129 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 ACKR3P25106 362 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 FOXK2Q01167 660 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 POU4F2Q12837 409 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 BIKQ13323 160 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 RBM39Q14498 530 aaKnown RBP17.57■□□□□ 0.4
HMGA1-205ENST00000447654 PRSS53Q2L4Q9 553 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 MST1LQ2TV78 715 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 PCGF3Q3KNV8 242 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 PLBD1Q6P4A8 553 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 TPRG1Q6ZUI0 275 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 MRPL43Q8N983 215 aaKnown RBP17.57■□□□□ 0.4
HMGA1-205ENST00000447654 CXorf40AQ8TE69 158 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 DUSP19Q8WTR2 217 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 WDR34Q96EX3 536 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 TBX5Q99593 518 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 SLC25A21Q9BQT8 299 aaPredicted RBP17.57■□□□□ 0.4
HMGA1-205ENST00000447654 EXO5Q9H790 373 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 KIF26AQ9ULI4 1882 aaPredicted RBP17.57■□□□□ 0.4
HMGA1-205ENST00000447654 BTBD17A6NE02 478 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 GPRIN2O60269 458 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 CDK2P24941 298 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 ZNF85Q03923 595 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 CDK5R1Q15078 307 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 ALG11Q2TAA5 492 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 PRAMEF8Q5VWM4 474 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 PRAMEF7Q5VXH5 474 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 SYS1Q8N2H4 156 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 SMPDL3AQ92484 453 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 SMPDL3BQ92485 455 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 DIO2Q92813 273 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 HS6ST2Q96MM7 605 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 ZNF559Q9BR84 538 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 SEMA6CQ9H3T2 930 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 GAR1Q9NY12 217 aaKnown RBP17.57■□□□□ 0.4
HMGA1-205ENST00000447654 LPAR3Q9UBY5 353 aa17.57■□□□□ 0.4
HMGA1-205ENST00000447654 KLHL18O94889 574 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 SLC2A10O95528 541 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 EPPINO95925 133 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 SBK2P0C263 348 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 OR4E1P0C645 316 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 FAM157CP0CG43 387 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 SRMP19623 302 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 AIMP2Q13155 320 aaKnown RBP17.56■□□□□ 0.4
HMGA1-205ENST00000447654 RPE65Q16518 533 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 OR2A12Q8NGT7 310 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 OR2G2Q8NGZ5 317 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 C3orf49Q96BT1 292 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 LAT2Q9GZY6 243 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 DMRT3Q9NQL9 472 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 B4GALT6Q9UBX8 382 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 CACFD1Q9UGQ2 172 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 IL20RAQ9UHF4 553 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 PPIL1Q9Y3C6 166 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 TEX13DA0A0J9YY54 714 aaPredicted RBP17.56■□□□□ 0.4
HMGA1-205ENST00000447654 URADA6NGE7 173 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 NDUFS1P28331 727 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 CTNNB1P35222 781 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 LY6G5CQ5SRR4 150 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 LIPNQ5VXI9 398 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 NSUN5P2Q63ZY6 315 aa17.56■□□□□ 0.4
HMGA1-205ENST00000447654 AGTRAPQ6RW13 159 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms