RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 B4GALT2O60909 372 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 TEAD2Q15562 447 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 SLC25A30Q5SVS4 291 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 GLYATL3Q5SZD4 288 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 GPR157Q5UAW9 335 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 SYT9Q86SS6 491 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 ABHD1Q96SE0 405 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 PNO1Q9NRX1 252 aaKnown RBP7.29□□□□□ -1.24
SMG1-202ENST00000446231 UQCC1Q9NVA1 299 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 KCNK6Q9Y257 313 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 A6NLC8 198 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 ZNF25P17030 456 aaPredicted RBP7.29□□□□□ -1.24
SMG1-202ENST00000446231 CTXN1P60606 82 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 AMIGO3Q86WK7 504 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 NPRL2Q8WTW4 380 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 LRIG1Q96JA1 1093 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 H2BFMP0C1H6 154 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 ZNF8P17098 575 aaPredicted RBP7.29□□□□□ -1.24
SMG1-202ENST00000446231 CASRP41180 1078 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 HMGA2P52926 109 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 ARHGAP19Q14CB8 494 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 OR2G3Q8NGZ4 309 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 BPIFA2Q96DR5 249 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 SEC61A2Q9H9S3 476 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 LEFTY1O75610 366 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 MPC2O95563 127 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 HTR2CP28335 458 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 TACR3P29371 465 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 CSNK1A1LQ8N752 337 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 OR13C8Q8NGS7 320 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 CA5BP1Q8WTZ4 195 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 A0A0U1RQF3 1178 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 IFITM5A6NNB3 132 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 IGF2P01344 180 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 HBE1P02100 147 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 HBQ1P09105 142 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 HOXC13P31276 330 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 KCNJ5P48544 419 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 PAQR9Q6ZVX9 377 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 RBM45Q8IUH3 476 aaKnown RBP7.29□□□□□ -1.24
SMG1-202ENST00000446231 SEMA6DQ8NFY4 1073 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 OR4D6Q8NGJ1 314 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 RAB39BQ96DA2 213 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 SIDT1Q9NXL6 827 aaKnown RBP7.29□□□□□ -1.24
SMG1-202ENST00000446231 GALP22466 123 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 PTGFRP43088 359 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 TCTN3Q6NUS6 607 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 OR13C9Q8NGT0 318 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 SMARCD2Q92925 531 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 TAF9BQ9HBM6 251 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 FAM221BA6H8Z2 402 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 JTBO76095 146 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 OR8G3PP0DMU2 310 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 RBMS3Q6XE24 437 aaKnown RBP7.29□□□□□ -1.24
SMG1-202ENST00000446231 SSX7Q7RTT5 188 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 C15orf54Q8N8G6 183 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 EVA1AQ9H8M9 152 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 RPL34P49207 117 aaKnown RBP7.29□□□□□ -1.24
SMG1-202ENST00000446231 KLHDC8AQ8IYD2 350 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 ARL14EPQ8N8R7 260 aaPredicted RBP7.29□□□□□ -1.24
SMG1-202ENST00000446231 LMLNQ96KR4 655 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 FBXO10Q9UK96 956 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 TBC1D3DA0A087WVF3 549 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 TBC1D3IA0A087WXS9 549 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 TBC1D3EA0A087X179 549 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 TBC1D3KA0A087X1G2 549 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 TBC1D3FA6NER0 549 aaPredicted RBP7.29□□□□□ -1.24
SMG1-202ENST00000446231 LINC00587B1AMM8 73 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 TBC1D3LB9A6J9 549 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 TBC1D3HP0C7X1 549 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 HAGHQ16775 308 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 GGNBP1Q5YKI7 109 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 TBC1D3GQ6DHY5 549 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 TBC1D3CQ6IPX1 549 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 TMPRSS9Q7Z410 1059 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 TBC1D3Q8IZP1 549 aaPredicted RBP7.29□□□□□ -1.24
SMG1-202ENST00000446231 HIST1H2AAQ96QV6 131 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 MIXL1Q9H2W2 232 aa7.29□□□□□ -1.24
SMG1-202ENST00000446231 PQBP1O60828 265 aaKnown RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 FREM3P0C091 2139 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 ZNF16P17020 682 aaPredicted RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 CTSOP43234 321 aaPredicted RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 TBL1XR1Q9BZK7 514 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 PPP1R3EQ9H7J1 279 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 PCDHGA5Q9Y5G8 931 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 PCNX2A6NKB5 2137 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 PNMTP11086 282 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 KLF9Q13886 244 aaPredicted RBP7.28□□□□□ -1.24
SMG1-202ENST00000446231 IQCJQ1A5X6 159 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 LCN10Q6JVE6 187 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 VRK2Q86Y07 508 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 OR11H7Q8NGC8 314 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 MEGF10Q96KG7 1140 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 CXCL2P19875 107 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 ZNF805Q5CZA5 627 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 Q6ZTK2 550 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 OR9K2Q8NGE7 335 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 RNF181Q9P0P0 153 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 GLTPD2A6NH11 291 aa7.28□□□□□ -1.24
SMG1-202ENST00000446231 FABP4P15090 132 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms