RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 MENTQ9BUN1 341 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 ULBP3Q9BZM4 244 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 MRPS30Q9NP92 439 aaKnown RBP12.76□□□□□ -0.37
VPS52-212ENST00000445902 GSN-AS1Q9NRJ2 163 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 MYEF2Q9P2K5 600 aaKnown RBP12.76□□□□□ -0.37
VPS52-212ENST00000445902 ZNF629Q9UEG4 869 aaPredicted RBP12.76□□□□□ -0.37
VPS52-212ENST00000445902 PLEKHA6Q9Y2H5 1048 aa12.76□□□□□ -0.37
VPS52-212ENST00000445902 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.75□□□□□ -0.37
VPS52-212ENST00000445902 MCIDASD6RGH6 385 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 AKAIN1P0CW23 69 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 ATP1B3P54709 279 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 PON3Q15166 354 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 LY6G5CQ5SRR4 150 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 KCNRGQ8N5I3 272 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 OR10AC1Q8NH08 325 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 FGF13Q92913 245 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 MRGPRX3Q96LB0 322 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 ZNF681Q96N22 645 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 MFRPQ9BY79 579 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 VCANP13611 3396 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 RNF222A6NCQ9 220 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 OR2AT4A6NND4 320 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 ZNF705EA8MWA4 302 aaPredicted RBP12.75□□□□□ -0.37
VPS52-212ENST00000445902 CSF1P09603 554 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 CALCBP10092 127 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 RPL4P36578 427 aaKnown RBP12.75□□□□□ -0.37
VPS52-212ENST00000445902 BTN3A2P78410 334 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 TRMT12Q53H54 448 aaKnown RBP12.75□□□□□ -0.37
VPS52-212ENST00000445902 RPL13AP3Q6NVV1 102 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 BIVMQ86UB2 503 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 CACUL1Q86Y37 369 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 SLC2A12Q8TD20 617 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 NIT2Q9NQR4 276 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 SPHK1Q9NYA1 384 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 STEAP1Q9UHE8 339 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 NOP16Q9Y3C1 178 aaKnown RBP12.75□□□□□ -0.37
VPS52-212ENST00000445902 FAM96BQ9Y3D0 163 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 MEX3AA1L020 520 aaKnown RBP12.75□□□□□ -0.37
VPS52-212ENST00000445902 NDUFS6O75380 124 aaKnown RBP12.75□□□□□ -0.37
VPS52-212ENST00000445902 SLC6A6P31641 620 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 RORAP35398 523 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 SLC7A9P82251 487 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 MPPED2Q15777 294 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 ARHGAP11AQ6P4F7 1023 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 RNF113BQ8IZP6 322 aaKnown RBP12.75□□□□□ -0.37
VPS52-212ENST00000445902 ZNF511Q8NB15 262 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 OR51A4Q8NGJ6 313 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 RASD2Q96D21 266 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 SGIP1Q9BQI5 828 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 SLITRK2Q9H156 845 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 COMMD9Q9P000 198 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 GPN3Q9UHW5 284 aaPredicted RBP12.75□□□□□ -0.37
VPS52-212ENST00000445902 TNFSF18Q9UNG2 199 aa12.75□□□□□ -0.37
VPS52-212ENST00000445902 C17orf113A0A1B0GUU1 675 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 TMEM82A0PJX8 343 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 DUXAA6NLW8 204 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 XRCC3O43542 346 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 AGTR1P30556 359 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 RPS27P42677 84 aaKnown RBP12.74□□□□□ -0.37
VPS52-212ENST00000445902 CAPZA1P52907 286 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 NTHL1P78549 312 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 RBM39Q14498 530 aaKnown RBP12.74□□□□□ -0.37
VPS52-212ENST00000445902 ZNF234Q14588 700 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 TCEA2Q15560 299 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 MICBQ29980 383 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 SCGB2B2Q4G0G5 96 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 EIPR1Q53HC9 387 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 DHRS7BQ6IAN0 325 aaPredicted RBP12.74□□□□□ -0.37
VPS52-212ENST00000445902 STEAP1BQ6NZ63 245 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 ZNF600Q6ZNG1 722 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 PPP1R1CQ8WVI7 109 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 TSSK2Q96PF2 358 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 LGR4Q9BXB1 951 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 ZMAT3Q9HA38 289 aaKnown RBP12.74□□□□□ -0.37
VPS52-212ENST00000445902 APOBEC3BQ9UH17 382 aaKnown RBP12.74□□□□□ -0.37
VPS52-212ENST00000445902 FARSAQ9Y285 508 aaKnown RBP12.74□□□□□ -0.37
VPS52-212ENST00000445902 NUP210LQ5VU65 1888 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 GGT3PA6NGU5 568 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 GPRIN2O60269 458 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 ILF3Q12906 894 aaKnown RBP eCLIP12.74□□□□□ -0.37
VPS52-212ENST00000445902 OTPQ5XKR4 325 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 C11orf87Q6NUJ2 197 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 NRSN1Q8IZ57 195 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 OR2A1Q8NGT9 310 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 SLC22A8Q8TCC7 542 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 MICU1Q9BPX6 476 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 BCL2L14Q9BZR8 327 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 ZFP57Q9NU63 452 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 CDV3Q9UKY7 258 aaKnown RBP12.74□□□□□ -0.37
VPS52-212ENST00000445902 HEATR5AQ86XA9 2040 aa12.74□□□□□ -0.37
VPS52-212ENST00000445902 RAD1O60671 282 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 RD3LP0DJH9 198 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 ERGP11308 486 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 PNLIPRP2P54317 469 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 PRKCZQ05513 592 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 PRDX1Q06830 199 aaKnown RBP12.73□□□□□ -0.37
VPS52-212ENST00000445902 DUSP8Q13202 625 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 NR0B2Q15466 257 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 NKAIN2Q5VXU1 208 aa12.73□□□□□ -0.37
VPS52-212ENST00000445902 ARMC10Q8N2F6 343 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms