RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 OR1D4P47884 311 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 CFAP77Q6ZQR2 320 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 RFPL4BQ6ZWI9 263 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 OR51D1Q8NGF3 324 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 ARL11Q969Q4 196 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 B8ZZF3 427 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 LALBAP00709 142 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 CD6P30203 668 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 TMEM31Q5JXX7 168 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 IDO2Q6ZQW0 420 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 FRMD1Q8N878 549 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 STEAP2Q8NFT2 490 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 OR5T2Q8NGG2 359 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 OR52I2Q8NH67 350 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 ELSPBP1Q96BH3 223 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 SENP5Q96HI0 755 aaPredicted RBP15.29■□□□□ 0.04
TCOF1-206ENST00000445265 SLC19A3Q9BZV2 496 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 ZNF700Q9H0M5 742 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 PLSCR3Q9NRY6 295 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 ADAM18Q9Y3Q7 739 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 TRAV1-2A0A0B4J238 106 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 KRBOX1C9JBD0 128 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 PLRG1O43660 514 aaKnown RBP15.29■□□□□ 0.04
TCOF1-206ENST00000445265 BRINP1O60477 761 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 RAD51DO75771 328 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 ZNF806P0C7X5 589 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 CD38P28907 300 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 PXNP49023 591 aaPredicted RBP15.29■□□□□ 0.04
TCOF1-206ENST00000445265 CSNK2A1P68400 391 aaPredicted RBP15.29■□□□□ 0.04
TCOF1-206ENST00000445265 SORDQ00796 357 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 MEP1BQ16820 701 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 STEAP1BQ6NZ63 245 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 CSNK2A3Q8NEV1 391 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 OR13H1Q8NG92 308 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 SEC22CQ9BRL7 303 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 SLC7A11Q9UPY5 501 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 SUSD5O60279 629 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 ALKAL2Q6UX46 152 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 STX12Q86Y82 276 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 DCUN1D4Q92564 292 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 COX14Q96I36 57 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 FAM71F1Q96KD3 344 aaPredicted RBP15.29■□□□□ 0.04
TCOF1-206ENST00000445265 MAP3K3Q99759 626 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 RNF215Q9Y6U7 377 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 PSME4Q14997 1843 aa15.29■□□□□ 0.04
TCOF1-206ENST00000445265 RALGAPA2Q2PPJ7 1873 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 H0Y8X5 98 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 TMEM127O75204 238 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 S100A11P31949 105 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 TSC22D1Q15714 1073 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 TMPRSS11FQ6ZWK6 438 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 FAM3DQ96BQ1 224 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 DCLRE1CQ96SD1 692 aaKnown RBP15.28■□□□□ 0.04
TCOF1-206ENST00000445265 CD207Q9UJ71 328 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 POU3F1Q03052 451 aaPredicted RBP15.28■□□□□ 0.04
TCOF1-206ENST00000445265 CD163Q86VB7 1156 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 OR2L13Q8N349 312 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 IFITM5A6NNB3 132 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 CRTAPO75718 401 aaPredicted RBP15.28■□□□□ 0.04
TCOF1-206ENST00000445265 HCCSP53701 268 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 SLC25A30Q5SVS4 291 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 EEF1A1P5Q5VTE0 462 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 CA13Q8N1Q1 262 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 CLCC1Q96S66 551 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 EXOGQ9Y2C4 368 aaKnown RBP15.28■□□□□ 0.04
TCOF1-206ENST00000445265 ICMTO60725 284 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 GIPP09681 153 aaPredicted RBP15.28■□□□□ 0.04
TCOF1-206ENST00000445265 MAOAP21397 527 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 CASRP41180 1078 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 ZP2Q05996 745 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 OR13C5Q8NGS8 318 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 SLC25A21Q9BQT8 299 aaPredicted RBP15.28■□□□□ 0.04
TCOF1-206ENST00000445265 PLEKHB1Q9UF11 243 aaPredicted RBP15.28■□□□□ 0.04
TCOF1-206ENST00000445265 MYO16Q9Y6X6 1858 aa15.28■□□□□ 0.04
TCOF1-206ENST00000445265 LOC100289279A0A1B0GTE1 492 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 TRAPPC6AO75865 159 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 POU3F4P49335 361 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 FAM27D1Q5T7N8 215 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 AADACL4Q5VUY2 407 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 RAET1LQ5VY80 246 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 PARM1Q6UWI2 310 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 NAXEQ8NCW5 288 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 TMEM185AQ8NFB2 350 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 MR1Q95460 341 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 DDOQ99489 341 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 COPS3Q9UNS2 423 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 HIF3AQ9Y2N7 669 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 GPR55Q9Y2T6 319 aaPredicted RBP15.27■□□□□ 0.04
TCOF1-206ENST00000445265 ZNF705EA8MWA4 302 aaPredicted RBP15.27■□□□□ 0.04
TCOF1-206ENST00000445265 EPXP11678 715 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 TPMTP51580 245 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 GLCCI1Q86VQ1 547 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 IQCF2Q8IXL9 164 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 OR6M1Q8NGM8 313 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 UCN3Q969E3 161 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 ASF1BQ9NVP2 202 aa15.27■□□□□ 0.04
TCOF1-206ENST00000445265 H3BQ06 376 aaPredicted RBP15.27■□□□□ 0.03
TCOF1-206ENST00000445265 MT-ATP6P00846 226 aa15.27■□□□□ 0.03
TCOF1-206ENST00000445265 SEMG1P04279 462 aa15.27■□□□□ 0.03
TCOF1-206ENST00000445265 EMP2P54851 167 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms