RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 IGFBP5P24593 272 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 UQCRC1P31930 480 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 TOP3AQ13472 1001 aaPredicted RBP15.3■□□□□ 0.04
LIME1-202ENST00000444951 FHL1Q13642 323 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 DAG1Q14118 895 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 RNPS1Q15287 305 aaKnown RBP15.3■□□□□ 0.04
LIME1-202ENST00000444951 TAF11Q15544 211 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 CLEC12AQ5QGZ9 265 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 SMARCD3Q6STE5 483 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 THSD4Q6ZMP0 1018 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 TUSC5Q8IXB3 177 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 GALNT4Q8N4A0 578 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 CNEP1R1Q8N9A8 125 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 ADPRHL1Q8NDY3 354 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 SLC29A1Q99808 456 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 ENKD1Q9H0I2 346 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 OR52D1Q9H346 318 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 RNF122Q9H9V4 155 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 PAPOLBQ9NRJ5 636 aaKnown RBP15.3■□□□□ 0.04
LIME1-202ENST00000444951 INIPQ9NRY2 104 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 TBC1D23Q9NUY8 699 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 HIF3AQ9Y2N7 669 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 HIVEP1P15822 2718 aa15.3■□□□□ 0.04
LIME1-202ENST00000444951 MBD3L4A6NDZ8 208 aaPredicted RBP15.29■□□□□ 0.04
LIME1-202ENST00000444951 MBD3L3A6NE82 208 aaPredicted RBP15.29■□□□□ 0.04
LIME1-202ENST00000444951 MBD3L5A6NJ08 208 aaPredicted RBP15.29■□□□□ 0.04
LIME1-202ENST00000444951 ZNF716A6NP11 495 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 MCIDASD6RGH6 385 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 E9PLN8 166 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 FZD7O75084 574 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 PTP4A3O75365 173 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 TOXO94900 526 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 NDUFB2O95178 105 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 VAMP5O95183 116 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 RCBTB2O95199 551 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 TMIGD3P0DMS9 266 aaPredicted RBP15.29■□□□□ 0.04
LIME1-202ENST00000444951 FXYD6P3P58550 94 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 CTXN1P60606 82 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 RPS4XP62701 263 aaKnown RBP15.29■□□□□ 0.04
LIME1-202ENST00000444951 FOXF2Q12947 444 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 RIPK1Q13546 671 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 SLC17A1Q14916 467 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 FBXW10Q5XX13 1052 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 OR2A2Q6IF42 318 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 ZNF620Q6ZNG0 422 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 RASSF6Q6ZTQ3 369 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.29■□□□□ 0.04
LIME1-202ENST00000444951 MBD3L2Q8NHZ7 208 aaPredicted RBP15.29■□□□□ 0.04
LIME1-202ENST00000444951 RBM4BQ9BQ04 359 aaKnown RBP15.29■□□□□ 0.04
LIME1-202ENST00000444951 VKORC1Q9BQB6 163 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 IFT27Q9BW83 186 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 RBM4Q9BWF3 364 aaKnown RBP15.29■□□□□ 0.04
LIME1-202ENST00000444951 OSBPL10Q9BXB5 764 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 PLA2G12AQ9BZM1 189 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 NDEL1Q9GZM8 345 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 C12orf49Q9H741 205 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 EMC3Q9P0I2 261 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 B3GAT1Q9P2W7 334 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 POFUT2Q9Y2G5 429 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 CDH10Q9Y6N8 788 aa15.29■□□□□ 0.04
LIME1-202ENST00000444951 A0A1W2PNV4 684 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 A0A1W2PRG6 482 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 YES1P07947 543 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 IFNGR1P15260 489 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 CLDN17P56750 224 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 PRPS1P60891 318 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 ERVK-25P63136 954 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 PPP2R2BQ00005 443 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 ZP4Q12836 540 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 COX10Q12887 443 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 MELKQ14680 651 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 RFX4Q33E94 735 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 SLC36A3Q495N2 470 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 TMEM201Q5SNT2 666 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 KDM4DQ6B0I6 523 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 TMEM211Q6ICI0 200 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 CREB3L2Q70SY1 520 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 SLC35D2Q76EJ3 337 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 PXKQ7Z7A4 578 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 ACBD4Q8NC06 268 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 NAXEQ8NCW5 288 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 ANKK1Q8NFD2 765 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 OR52L1Q8NGH7 329 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 GMPPAQ96IJ6 420 aaPredicted RBP15.28■□□□□ 0.04
LIME1-202ENST00000444951 TXNDC15Q96J42 360 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 ZNF385AQ96PM9 386 aaKnown RBP15.28■□□□□ 0.04
LIME1-202ENST00000444951 EMC6Q9BV81 110 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 KATNB1Q9BVA0 655 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 SF3B5Q9BWJ5 86 aaKnown RBP15.28■□□□□ 0.04
LIME1-202ENST00000444951 POLDIP3Q9BY77 421 aaKnown RBP15.28■□□□□ 0.04
LIME1-202ENST00000444951 RIBC2Q9H4K1 309 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 MED29Q9NX70 200 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 REV1Q9UBZ9 1251 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 TMEFF2Q9UIK5 374 aaPredicted RBP15.28■□□□□ 0.04
LIME1-202ENST00000444951 ING1Q9UK53 422 aaPredicted RBP15.28■□□□□ 0.04
LIME1-202ENST00000444951 ADAM18Q9Y3Q7 739 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 ORC6Q9Y5N6 252 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 NOX1Q9Y5S8 564 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 FLVCR1Q9Y5Y0 555 aa15.28■□□□□ 0.04
LIME1-202ENST00000444951 INTS1Q8N201 2190 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms