RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 QKIQ96PU8 341 aaKnown RBP eCLIP3.24□□□□□ -1.89
HMGB3P6-201ENST00000444896 PEBP4Q96S96 227 aa3.24□□□□□ -1.89
HMGB3P6-201ENST00000444896 NAT9Q9BTE0 207 aa3.24□□□□□ -1.89
HMGB3P6-201ENST00000444896 TSSK1BQ9BXA7 367 aa3.24□□□□□ -1.89
HMGB3P6-201ENST00000444896 YTHDF1Q9BYJ9 559 aaKnown RBP3.24□□□□□ -1.89
HMGB3P6-201ENST00000444896 COMMD4Q9H0A8 199 aa3.24□□□□□ -1.89
HMGB3P6-201ENST00000444896 SLC25A51Q9H1U9 297 aa3.24□□□□□ -1.89
HMGB3P6-201ENST00000444896 DHX35Q9H5Z1 703 aaKnown RBP3.24□□□□□ -1.89
HMGB3P6-201ENST00000444896 LPAR2Q9HBW0 351 aa3.24□□□□□ -1.89
HMGB3P6-201ENST00000444896 FAM49BQ9NUQ9 324 aa3.24□□□□□ -1.89
HMGB3P6-201ENST00000444896 ETNK2Q9NVF9 386 aa3.24□□□□□ -1.89
HMGB3P6-201ENST00000444896 UTP6Q9NYH9 597 aaKnown RBP3.24□□□□□ -1.89
HMGB3P6-201ENST00000444896 MGAT4BQ9UQ53 548 aa3.24□□□□□ -1.89
HMGB3P6-201ENST00000444896 EIF3LQ9Y262 564 aaKnown RBP3.24□□□□□ -1.89
HMGB3P6-201ENST00000444896 HEY1Q9Y5J3 304 aa3.24□□□□□ -1.89
HMGB3P6-201ENST00000444896 PDCD11Q14690 1871 aaKnown RBP3.24□□□□□ -1.89
HMGB3P6-201ENST00000444896 IGLV8-61A0A075B6I0 122 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 MBLAC1A4D2B0 266 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 LRRC30A6NM36 301 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 TRIM49D1C9J1S8 452 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 AP3B1O00203 1094 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 PIRO00625 290 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 SDHDO14521 159 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 VPS26AO75436 327 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 BANF1O75531 89 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 ATP6V1G2O95670 118 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 SNAI1O95863 264 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 IL1BP01584 269 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 MLNP12872 115 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 CCDC130P13994 396 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 KCNE1P15382 129 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 PGAM1P18669 254 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 DPP4P27487 766 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 FOXN2P32314 431 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 SCN1AP35498 2009 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 PTGFRP43088 359 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 EMDP50402 254 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 CRYBB1P53674 252 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 GMFBP60983 142 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 HSF2Q03933 536 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 ADIGQ0VDE8 80 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 ZNF154Q13106 437 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 ZBTB6Q15916 424 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 SLC25A52Q3SY17 297 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 MARCH8Q5T0T0 291 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 TWF2Q6IBS0 349 aaKnown RBP3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 NLRP9Q7RTR0 991 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 HSD11B1LQ7Z5J1 315 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 TMEM86AQ8N2M4 240 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 PQLC3Q8N755 202 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 CCDC110Q8TBZ0 833 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 SLC2A14Q8TDB8 520 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 TCP10LQ8TDR4 215 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 DCAKDQ8WVC6 231 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 C10orf82Q8WW14 230 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 DNAJB3Q8WWF6 145 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 HTR3CQ8WXA8 447 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 ZNF75CPQ92670 426 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 UPRTQ96BW1 309 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 ELMO2Q96JJ3 720 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 CSPG4P5Q96PW8 444 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 EBNA1BP2Q99848 306 aaKnown RBP3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 SIKE1Q9BRV8 207 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 MED10Q9BTT4 135 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 TRIM62Q9BVG3 475 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 DUSP16Q9BY84 665 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 NXF3Q9H4D5 531 aaKnown RBP3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 FAM96AQ9H5X1 160 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 ZNF702PQ9H963 129 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 POPDC2Q9HBU9 364 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 SAR1AQ9NR31 198 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 GPATCH2LQ9NWQ4 482 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 RPL26L1Q9UNX3 145 aaKnown RBP3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 CA5BQ9Y2D0 317 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 Q9Y3F1 56 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 GMPPBQ9Y5P6 360 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 MAD1L1Q9Y6D9 718 aa3.23□□□□□ -1.89
HMGB3P6-201ENST00000444896 UTRNP46939 3433 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 TRIP11Q15643 1979 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 A0A0G2JND7 137 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 SMIM28A0A1B0GU29 152 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 SAGE2PA6NJ88 616 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 FAM159BA6NKW6 160 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 E7ENQ6 273 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 F8WDY8 70 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 GOLGA8RI6L899 631 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 HAT1O14929 419 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 BIRC5O15392 142 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 MFSD11O43934 449 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 CCDC22O60826 627 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 LY6G6DO95868 133 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 UQCRBP14927 111 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 BGNP21810 368 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 PAICSP22234 425 aaKnown RBP3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 CALB2P22676 271 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 ADRA1AP35348 466 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 CD86P42081 329 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 MAGEA3P43357 314 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 LIM2P55344 173 aa3.22□□□□□ -1.89
HMGB3P6-201ENST00000444896 TPI1P60174 286 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms