RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 GATA3P23771 443 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 CRYBB2P43320 205 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 RPS5P46782 204 aaKnown RBP12.28□□□□□ -0.44
HMGN1-208ENST00000443046 MVDP53602 400 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 CHI3L2Q15782 390 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 OCLNQ16625 522 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 DPY19L1Q2PZI1 675 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 TRMT5Q32P41 509 aaKnown RBP12.28□□□□□ -0.44
HMGN1-208ENST00000443046 MIDNQ504T8 468 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 LIN52Q52LA3 116 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 RNF220Q5VTB9 566 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 DCAF12L2Q5VW00 463 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 LRR1Q96L50 414 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 DDX28Q9NUL7 540 aaKnown RBP12.28□□□□□ -0.44
HMGN1-208ENST00000443046 NKIRAS2Q9NYR9 191 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 FZR1Q9UM11 496 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 PPIAL4AQ9Y536 164 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 NOX1Q9Y5S8 564 aa12.28□□□□□ -0.44
HMGN1-208ENST00000443046 IGLV3-9A0A075B6K5 115 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 CCDC154A6NI56 674 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 SMIM23A6NLE4 172 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 C17orf100A8MU93 164 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 M0R3G1 203 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 PRTN3P24158 256 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 FPR2P25090 351 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 CDKN2CP42773 168 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 ANXA11P50995 505 aaKnown RBP12.27□□□□□ -0.45
HMGN1-208ENST00000443046 RAB1AP62820 205 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 MVKQ03426 396 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 PIGFQ07326 219 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 ZP4Q12836 540 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 AVPI1Q5T686 147 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 GKAP1Q5VSY0 366 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-208ENST00000443046 C6orf89Q6UWU4 347 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 SERPINA11Q86U17 422 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 ZNF584Q8IVC4 421 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 WDFY1Q8IWB7 410 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 ADPRHL1Q8NDY3 354 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 TAAR8Q969N4 342 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 RAB39BQ96DA2 213 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 C1orf147Q96MC9 270 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-208ENST00000443046 DUSP13Q9UII6 198 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 ZNF443Q9Y2A4 671 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-208ENST00000443046 CORINQ9Y5Q5 1042 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 WNK1Q9H4A3 2382 aa12.27□□□□□ -0.45
HMGN1-208ENST00000443046 MS4A18H0YCH9 400 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 M0R082 166 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 AIM2O14862 343 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 CDC14BO60729 498 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 ZNF250P15622 560 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 GIPRP48546 466 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 PTDSS1P48651 473 aaKnown RBP12.26□□□□□ -0.45
HMGN1-208ENST00000443046 CLNS1AP54105 237 aaKnown RBP12.26□□□□□ -0.45
HMGN1-208ENST00000443046 AQP5P55064 265 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 CCL8P80075 99 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 GALK2Q01415 458 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 C1DQ13901 141 aaKnown RBP12.26□□□□□ -0.45
HMGN1-208ENST00000443046 MS4A18Q3C1V0 323 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 PCGF3Q3KNV8 242 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 ATG16L1Q676U5 607 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 ZNF813Q6ZN06 617 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 H1FNTQ75WM6 255 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-208ENST00000443046 DOK3Q7L591 496 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 TRIML2Q8N7C3 387 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 SIGLECL1Q8N7X8 197 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 SYT14Q8NB59 555 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 ZNF417Q8TAU3 575 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 TCP10LQ8TDR4 215 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 C22orf15Q8WYQ4 148 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 SLC41A3Q96GZ6 507 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 TEX37Q96LM6 180 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 C16orf45Q96MC5 204 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-208ENST00000443046 ZNF587Q96SQ5 575 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-208ENST00000443046 C1QTNF5Q9BXJ0 243 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 C7orf69Q9H7B7 122 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 UNKLQ9H9P5 680 aaKnown RBP12.26□□□□□ -0.45
HMGN1-208ENST00000443046 ZMAT3Q9HA38 289 aaKnown RBP12.26□□□□□ -0.45
HMGN1-208ENST00000443046 HINT3Q9NQE9 182 aaKnown RBP12.26□□□□□ -0.45
HMGN1-208ENST00000443046 SLC7A8Q9UHI5 535 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 FBXL3Q9UKT7 428 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 WIPI2Q9Y4P8 454 aa12.26□□□□□ -0.45
HMGN1-208ENST00000443046 PPIAL4EA0A075B759 164 aa12.25□□□□□ -0.45
HMGN1-208ENST00000443046 PPIAL4CA0A0B4J2A2 164 aa12.25□□□□□ -0.45
HMGN1-208ENST00000443046 A0A1W2PPW3 197 aa12.25□□□□□ -0.45
HMGN1-208ENST00000443046 POM121CA8CG34 1229 aa12.25□□□□□ -0.45
HMGN1-208ENST00000443046 E9PBE3 544 aa12.25□□□□□ -0.45
HMGN1-208ENST00000443046 PPIAL4DF5H284 164 aa12.25□□□□□ -0.45
HMGN1-208ENST00000443046 AKAP8O43823 692 aaKnown RBP12.25□□□□□ -0.45
HMGN1-208ENST00000443046 OR2T1O43869 369 aa12.25□□□□□ -0.45
HMGN1-208ENST00000443046 CLPTM1O96005 669 aa12.25□□□□□ -0.45
HMGN1-208ENST00000443046 HPRP00739 348 aa12.25□□□□□ -0.45
HMGN1-208ENST00000443046 SERPINA5P05154 406 aa12.25□□□□□ -0.45
HMGN1-208ENST00000443046 BPGMP07738 259 aa12.25□□□□□ -0.45
HMGN1-208ENST00000443046 PPIAL4FP0DN26 164 aa12.25□□□□□ -0.45
HMGN1-208ENST00000443046 HLA-DOBP13765 273 aa12.25□□□□□ -0.45
HMGN1-208ENST00000443046 NCF2P19878 526 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-208ENST00000443046 GRPRP30550 384 aa12.25□□□□□ -0.45
HMGN1-208ENST00000443046 S100A3P33764 101 aa12.25□□□□□ -0.45
HMGN1-208ENST00000443046 MFSD13AQ14CX5 517 aa12.25□□□□□ -0.45
HMGN1-208ENST00000443046 GLIPR1L2Q4G1C9 344 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms