RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 TBC1D24Q9ULP9 559 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 RNF6Q9Y252 685 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 MRPS18BQ9Y676 258 aaKnown RBP7.34□□□□□ -1.23
CCDC39-201ENST00000442201 CNOT1A5YKK6 2376 aaKnown RBP7.34□□□□□ -1.23
CCDC39-201ENST00000442201 C17orf51A8MQB3 221 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 MASP2O00187 686 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 CDC42EP2O14613 210 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 ADAM10O14672 748 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 SSX4O60224 188 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 MPZL2O60487 215 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 SAGP10523 405 aaPredicted RBP7.34□□□□□ -1.23
CCDC39-201ENST00000442201 GP1BBP13224 206 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 VAMP1P23763 118 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 CAPZA2P47755 286 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 SMSP52788 366 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 MLF1P58340 268 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 CXCR4P61073 352 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 CRYZQ08257 329 aaKnown RBP7.34□□□□□ -1.23
CCDC39-201ENST00000442201 CHAF1BQ13112 559 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 GINS1Q14691 196 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 COL28A1Q2UY09 1125 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 IGF2-ASQ6U949 168 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 OVCH2Q7RTZ1 564 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 ATG4DQ86TL0 474 aaPredicted RBP7.34□□□□□ -1.23
CCDC39-201ENST00000442201 DND1Q8IYX4 353 aaKnown RBP7.34□□□□□ -1.23
CCDC39-201ENST00000442201 PARP16Q8N5Y8 322 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 CLDN22Q8N7P3 220 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 CLRN3Q8NCR9 226 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 OSTF1Q92882 214 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 DCLRE1CQ96SD1 692 aaKnown RBP7.34□□□□□ -1.23
CCDC39-201ENST00000442201 SAV1Q9H4B6 383 aaPredicted RBP7.34□□□□□ -1.23
CCDC39-201ENST00000442201 HHATLQ9HCP6 504 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 GALNT9Q9HCQ5 603 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 ASCL3Q9NQ33 180 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 EXTL2Q9UBQ6 330 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 CDH10Q9Y6N8 788 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 FAM186AA6NE01 2351 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 SDK2Q58EX2 2172 aa7.34□□□□□ -1.23
CCDC39-201ENST00000442201 PTPRZ1P23471 2315 aaPredicted RBP7.34□□□□□ -1.24
CCDC39-201ENST00000442201 LOC390937A0A1W2PQ73 354 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 CIB4A0PJX0 185 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 UNC119BA6NIH7 251 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 EFCAB9A8MZ26 197 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 SLC1A7O00341 560 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 CDC40O60508 579 aaKnown RBP eCLIP7.33□□□□□ -1.24
CCDC39-201ENST00000442201 MAKP20794 623 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 MST1P26927 711 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 TACR3P29371 465 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 SUMO3P55854 103 aaPredicted RBP7.33□□□□□ -1.24
CCDC39-201ENST00000442201 Q0VFX4 171 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 QPRTQ15274 297 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 FAM76BQ5HYJ3 339 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 HES5Q5TA89 166 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 OR5M10Q6IEU7 315 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 LAIR2Q6ISS4 152 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 SLC27A4Q6P1M0 643 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 PLBD1Q6P4A8 553 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 ZNF620Q6ZNG0 422 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 COMMD7Q86VX2 200 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 GTF3AQ92664 365 aaKnown RBP7.33□□□□□ -1.24
CCDC39-201ENST00000442201 SDHCQ99643 169 aaPredicted RBP7.33□□□□□ -1.24
CCDC39-201ENST00000442201 KLHDC3Q9BQ90 382 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 TEX12Q9BXU0 123 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 ADAM19Q9H013 955 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 RACGAP1Q9H0H5 632 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 SCN3BQ9NY72 215 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 DLL3Q9NYJ7 618 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 TAS2R10Q9NYW0 307 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 PPP4R1LQ9P1A2 415 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 AASSQ9UDR5 926 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 RAB19A4D1S5 217 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 C2orf72A6NCS6 295 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 TGM6O95932 706 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 BMP7P18075 431 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 MSX1P28360 303 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 FMO3P31513 532 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 RFX2P48378 723 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 GAS1P54826 345 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 CSNK2BP67870 215 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 CDK5Q00535 292 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 TOMM34Q15785 309 aaPredicted RBP7.33□□□□□ -1.24
CCDC39-201ENST00000442201 GRK1Q15835 563 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 C12orf73Q69YU5 71 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 BICRALQ6AI39 1079 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 TEX261Q6UWH6 196 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 PTCHD4Q6ZW05 846 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 IQCF1Q8N6M8 205 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 GPR119Q8TDV5 335 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 ADAMTS17Q8TE56 1095 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 TMEM234Q8WY98 164 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 ZNF566Q969W8 418 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 TMEM43Q9BTV4 400 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 TSSK6Q9BXA6 273 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 PRRG3Q9BZD7 231 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 PLA2G12AQ9BZM1 189 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 SLC25A19Q9HC21 320 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 ZNF226Q9NYT6 803 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 ZNF224Q9NZL3 707 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 TPRKBQ9Y3C4 175 aa7.33□□□□□ -1.24
CCDC39-201ENST00000442201 PCDHGB6Q9Y5F9 930 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms