RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 SLC7A7Q9UM01 511 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 CAPN7Q9Y6W3 813 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 PMF1-BGLAPU3KQ54 211 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 CR1P17927 2039 aa17.33■□□□□ 0.36
SHROOM1-204ENST00000440118 FN1P02751 2386 aaKnown RBP17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 IGHV1-18A0A0C4DH31 117 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 TRAPPC13A5PLN9 417 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 C11orf98E9PRG8 122 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 FZD7O75084 574 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 SEC14L2O76054 403 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 HPRP00739 348 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 ADORA3P0DMS8 318 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 UMPSP11172 480 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 APOBEC3AP31941 199 aaPredicted RBP17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 GUCY1A3Q02108 690 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 NPRL3Q12980 569 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 NPTX1Q15818 432 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 KRTAP21-3Q3LHN1 58 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 ERICH5Q6P6B1 374 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 ANKK1Q8NFD2 765 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 OR5J2Q8NH18 312 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 MAGEE2Q8TD90 523 aaPredicted RBP17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 HTRA1Q92743 480 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 FBXO17Q96EF6 278 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 SLC41A3Q96GZ6 507 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 EMC6Q9BV81 110 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 KATNB1Q9BVA0 655 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 REG4Q9BYZ8 158 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 GID8Q9NWU2 228 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 MED29Q9NX70 200 aa17.32■□□□□ 0.36
SHROOM1-204ENST00000440118 LOC102725191A0A1B0GVB3 256 aa17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 LRRN3E7EW58 273 aa17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 IFNA14P01570 189 aa17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 HIST1H2ABP04908 130 aa17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 HLA-DOBP13765 273 aa17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 HOXB1P14653 301 aaPredicted RBP17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 SNRPD2P62316 118 aaKnown RBP17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 C11orf71Q6IPW1 123 aa17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 VHLLQ6RSH7 139 aa17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 HIST3H2AQ7L7L0 130 aa17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 RBM45Q8IUH3 476 aaKnown RBP17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 HIST1H2ACQ93077 130 aa17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 BOD1Q96IK1 185 aa17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 ULBP2Q9BZM5 246 aa17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 SAR1AQ9NR31 198 aa17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 NANSQ9NR45 359 aa17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 ZNF446Q9NWS9 450 aa17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 BAG5Q9UL15 447 aa17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 SH3GLB1Q9Y371 365 aa17.31■□□□□ 0.36
SHROOM1-204ENST00000440118 LOC100653049A0A140TA62 436 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 SLC35F4A4IF30 521 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 ZNF99A8MXY4 864 aaPredicted RBP17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 MS4A18H0YCH9 400 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 RPL36A-HNRNPH2H7BZ11 118 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 KRT34O76011 436 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 CH25HO95992 272 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 NPPAP01160 153 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 CECR9P0C854 216 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 IDH3GP51553 393 aaPredicted RBP17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 TAS2R41P59536 307 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 CAMK2DQ13557 499 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 MS4A18Q3C1V0 323 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 LRRC23Q53EV4 343 aaPredicted RBP17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 DEF8Q6ZN54 512 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 PXKQ7Z7A4 578 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 TMEM123Q8N131 208 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 MPP4Q96JB8 637 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 USP22Q9UPT9 525 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 POFUT2Q9Y2G5 429 aa17.3■□□□□ 0.36
SHROOM1-204ENST00000440118 ARFGEF3Q5TH69 2177 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 INAFM1C9JVW0 142 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 H7C417 338 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 FXYD1O00168 92 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 PLPP3O14495 311 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 RNF13O43567 381 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 CSNK1A1P48729 337 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 NAAAQ02083 359 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 ZNF74Q16587 644 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 CGB2Q6NT52 195 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 CCDC80Q76M96 950 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 SLC46A3Q7Z3Q1 461 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 NANOGNBQ7Z5D8 188 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 CARM1Q86X55 608 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 CCDC36Q8IYA8 594 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 C20orf196Q8IYI0 205 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 OR4D11Q8NGI4 311 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 NANOS1Q8WY41 292 aaKnown RBP17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 NELFAQ9H3P2 528 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 MED4Q9NPJ6 270 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 CA10Q9NS85 328 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 FKBP7Q9Y680 259 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 JMJD1CQ15652 2540 aa17.29■□□□□ 0.36
SHROOM1-204ENST00000440118 ABCA1O95477 2261 aa17.28■□□□□ 0.36
SHROOM1-204ENST00000440118 CD79AP11912 226 aa17.28■□□□□ 0.36
SHROOM1-204ENST00000440118 IFNGR1P15260 489 aa17.28■□□□□ 0.36
SHROOM1-204ENST00000440118 ARR3P36575 388 aa17.28■□□□□ 0.36
SHROOM1-204ENST00000440118 BIDP55957 195 aa17.28■□□□□ 0.36
SHROOM1-204ENST00000440118 DSCR9P59020 149 aa17.28■□□□□ 0.36
SHROOM1-204ENST00000440118 C3orf36Q3SXR2 165 aa17.28■□□□□ 0.36
SHROOM1-204ENST00000440118 WDR88Q6ZMY6 472 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms