RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 NKAIN4Q8IVV8 208 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 ANKS4BQ8N8V4 417 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 WDR31Q8NA23 367 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 SMAP2Q8WU79 429 aaPredicted RBP9.18□□□□□ -0.94
MCF2L-216ENST00000439475 GTPBP3Q969Y2 492 aaKnown RBP9.18□□□□□ -0.94
MCF2L-216ENST00000439475 ALKBH3Q96Q83 286 aaPredicted RBP9.18□□□□□ -0.94
MCF2L-216ENST00000439475 PRSS27Q9BQR3 290 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 ZNF426Q9BUY5 554 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 EMC6Q9BV81 110 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 FNDC11Q9BVV2 318 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 C1QTNF6Q9BXI9 259 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 STX18Q9P2W9 335 aaKnown RBP9.18□□□□□ -0.94
MCF2L-216ENST00000439475 ABCD2Q9UBJ2 740 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 SAMD4AQ9UPU9 718 aaKnown RBP9.18□□□□□ -0.94
MCF2L-216ENST00000439475 LAMP3Q9UQV4 416 aa9.18□□□□□ -0.94
MCF2L-216ENST00000439475 FAM32AQ9Y421 112 aaKnown RBP9.18□□□□□ -0.94
MCF2L-216ENST00000439475 ABCA12Q86UK0 2595 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 A0A1W2PRG6 482 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 BLOC1S5-TXNDC5H3BN57 136 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 M0R3G1 203 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 TRAF3IP2O43734 574 aaPredicted RBP9.17□□□□□ -0.94
MCF2L-216ENST00000439475 OR7A10O76100 309 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 LYPD3O95274 346 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 BCL10O95999 233 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 ASAH2BP0C7U1 165 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 BMP4P12644 408 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 HLA-DOBP13765 273 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 CSNK1A1P48729 337 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 ADAM8P78325 824 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 CAMK2DQ13557 499 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 TRAM2Q15035 370 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 CEACAM16Q2WEN9 425 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 SAMD4BQ5PRF9 694 aaKnown RBP9.17□□□□□ -0.94
MCF2L-216ENST00000439475 AGAP6Q5VW22 663 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 CARD17Q5XLA6 110 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 WDR88Q6ZMY6 472 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 SLC35D2Q76EJ3 337 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 HDDC2Q7Z4H3 204 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 C20orf196Q8IYI0 205 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 RNF113BQ8IZP6 322 aaKnown RBP9.17□□□□□ -0.94
MCF2L-216ENST00000439475 PGAM4Q8N0Y7 254 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 KBTBD8Q8NFY9 601 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 OR6X1Q8NH79 312 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 BCL2L2Q92843 193 aaPredicted RBP9.17□□□□□ -0.94
MCF2L-216ENST00000439475 TXNDC15Q96J42 360 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 OR2M2Q96R28 347 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 CCT8L2Q96SF2 557 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 GSX2Q9BZM3 304 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 ULBP2Q9BZM5 246 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 CRLF2Q9HC73 371 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 GPR35Q9HC97 309 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 MEPEQ9NQ76 525 aaPredicted RBP9.17□□□□□ -0.94
MCF2L-216ENST00000439475 MED29Q9NX70 200 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 TAS2R5Q9NYW4 299 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 NPAP1Q9NZP6 1156 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 A4GNTQ9UNA3 340 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 ATP23Q9Y6H3 246 aa9.17□□□□□ -0.94
MCF2L-216ENST00000439475 MAST4O15021 2626 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 A0A096LPE4 126 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 ARPC4-TTLL3A0A0A6YYG9 625 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 A0A1W2PPZ6 126 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 ZNF99A8MXY4 864 aaPredicted RBP9.16□□□□□ -0.94
MCF2L-216ENST00000439475 MCIDASD6RGH6 385 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 FAM107AO95990 144 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 HPRP00739 348 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 CRYAAP02489 173 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 IFI30P13284 250 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 IFNGR1P15260 489 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 ARR3P36575 388 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 YAP1P46937 504 aaKnown RBP9.16□□□□□ -0.94
MCF2L-216ENST00000439475 UGT2B15P54855 530 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 CDH11P55287 796 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 BIDP55957 195 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 ARF1P84077 181 aaKnown RBP9.16□□□□□ -0.94
MCF2L-216ENST00000439475 KRT72Q14CN4 511 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 TAF11Q15544 211 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 C3orf36Q3SXR2 165 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 ANKDD1AQ495B1 522 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 SPATS1Q496A3 300 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 HIKESHIQ53FT3 197 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 SEZ6L2Q6UXD5 910 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 VTCN1Q7Z7D3 282 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 TSPYL5Q86VY4 417 aaPredicted RBP9.16□□□□□ -0.94
MCF2L-216ENST00000439475 LSRQ86X29 649 aaPredicted RBP9.16□□□□□ -0.94
MCF2L-216ENST00000439475 OFCC1Q8IZS5 231 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 TMEM123Q8N131 208 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 FBXL14Q8N1E6 418 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 LRRC17Q8N6Y2 441 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 FAM169BQ8N8A8 192 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 CCDC197Q8NCU1 140 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 IL17RDQ8NFM7 739 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 TMEM255BQ8WV15 326 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 LIPHQ8WWY8 451 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 NANOS1Q8WY41 292 aaKnown RBP9.16□□□□□ -0.94
MCF2L-216ENST00000439475 ZNF566Q969W8 418 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 PERPQ96FX8 193 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 DHRS9Q9BPW9 319 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 NDEL1Q9GZM8 345 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 GORASP2Q9H8Y8 452 aa9.16□□□□□ -0.94
MCF2L-216ENST00000439475 INIPQ9NRY2 104 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms