RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 C14orf178Q8N769 122 aaPredicted RBP2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 SNX31Q8N9S9 440 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 FNDC5Q8NAU1 212 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 FAM83FQ8NEG4 500 aaPredicted RBP2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 OR8J2Q8NGG1 315 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 OR9A4Q8NGU2 314 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 GLYATL2Q8WU03 294 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 TRUB1Q8WWH5 349 aaKnown RBP2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 FGGYQ96C11 551 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 AMDHD1Q96NU7 426 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 TESK2Q96S53 571 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 RIT2Q99578 217 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 SLC29A1Q99808 456 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 SPATA16Q9BXB7 569 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 DRC3Q9H069 523 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 ILKAPQ9H0C8 392 aaPredicted RBP2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 PPDPFQ9H3Y8 114 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 PARVBQ9HBI1 364 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 TUBG2Q9NRH3 451 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 C20orf96Q9NUD7 363 aaPredicted RBP2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 DCDC2Q9UHG0 476 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 ADAM28Q9UKQ2 775 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 STAP1Q9ULZ2 295 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 PACSIN2Q9UNF0 486 aaPredicted RBP2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 ABCG2Q9UNQ0 655 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 ZNF256Q9Y2P7 627 aaPredicted RBP2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 PPIAL4AQ9Y536 164 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 ATP10DQ9P241 1426 aa2.73□□□□□ -1.97
LSM1P1-201ENST00000438629 A0A1B0GVL5 298 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 OR6C70A6NIJ9 312 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 FAM74A7A6NL05 159 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 TRPC5OSA6NMA1 111 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 GABRR3A8MPY1 467 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 BTN3A3O00478 584 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 TBL1XO60907 577 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 LYPLA1O75608 230 aaPredicted RBP2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 CCNB2O95067 398 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 CLDN9O95484 217 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 MBP02144 154 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 HMGN1P05114 100 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 IL6P05231 212 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 CRYGBP07316 175 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 STAG3L2P0CL84 134 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 CCDC166P0CW27 439 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 CPN1P15169 458 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 ATF6P18850 670 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 XRCC1P18887 633 aaPredicted RBP2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 HOXA9P31269 272 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 RORAP35398 523 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 SPAM1P38567 509 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 RPL29P47914 159 aaKnown RBP2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 RFX3P48380 749 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 RPL8P62917 257 aaKnown RBP2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 SKP1P63208 163 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 BCL2L1Q07817 233 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 BST2Q10589 180 aaKnown RBP2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 SLAQ13239 276 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 ATXN7L3Q14CW9 347 aaPredicted RBP2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 USF2Q15853 346 aaPredicted RBP2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 HNRNPA1L2Q32P51 320 aaKnown RBP2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 LINC01620Q4KN68 170 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 DNAL1Q4LDG9 190 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 FAM74A3Q4VXF1 159 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 C9orf129Q5T035 196 aaKnown RBP2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 AGBL2Q5U5Z8 902 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 OR4F3Q6IEY1 312 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 CCDC121Q6ZUS5 278 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 NDUFAF7Q7L592 441 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 DCXRQ7Z4W1 244 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 ZNF677Q86XU0 584 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 SLC38A6Q8IZM9 456 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 TMEM123Q8N131 208 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 TBC1D19Q8N5T2 526 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 OR4D5Q8NGN0 318 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 UBA3Q8TBC4 463 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 FANK1Q8TC84 345 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 AENQ8WTP8 325 aaKnown RBP2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 DYDC1Q8WWB3 177 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 SLC25A38Q96DW6 304 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 ZNF514Q96K75 400 aaPredicted RBP2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 ZNF578Q96N58 590 aaPredicted RBP2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 ACBD6Q9BR61 282 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 TMEM121Q9BTD3 319 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 C20orf24Q9BUV8 137 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 PARD6BQ9BYG5 372 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 IL22Q9GZX6 179 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 MFFQ9GZY8 342 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 Q9H3A6 140 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 GEMIN7Q9H840 131 aaKnown RBP2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 POLE4Q9NR33 117 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 EURLQ9NYK6 297 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 NKIRAS1Q9NYS0 192 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 PSMC3IPQ9P2W1 217 aaPredicted RBP2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 SPRR3Q9UBC9 169 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 GNG12Q9UBI6 72 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 ZNF639Q9UID6 485 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 CACNG2Q9Y698 323 aa2.72□□□□□ -1.97
LSM1P1-201ENST00000438629 ELP1O95163 1332 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 CCDC171Q6TFL3 1326 aa2.71□□□□□ -1.98
LSM1P1-201ENST00000438629 CDHR2Q9BYE9 1310 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms