RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 GPR35Q9HC97 309 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 SLC12A4Q9UP95 1085 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 TRAPPC4Q9Y296 219 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 VPS13DQ5THJ4 4388 aa9.01□□□□□ -0.97
RTN4-211ENST00000438462 ZNF264O43296 627 aa9□□□□□ -0.97
RTN4-211ENST00000438462 RAD51CO43502 376 aa9□□□□□ -0.97
RTN4-211ENST00000438462 ADH4P08319 380 aa9□□□□□ -0.97
RTN4-211ENST00000438462 UBL4AP11441 157 aa9□□□□□ -0.97
RTN4-211ENST00000438462 CCNA2P20248 432 aa9□□□□□ -0.97
RTN4-211ENST00000438462 STX2P32856 288 aa9□□□□□ -0.97
RTN4-211ENST00000438462 TRA2BP62995 288 aaKnown RBP9□□□□□ -0.97
RTN4-211ENST00000438462 PMS2P3Q13401 168 aa9□□□□□ -0.97
RTN4-211ENST00000438462 DUSP5Q16690 384 aa9□□□□□ -0.97
RTN4-211ENST00000438462 TMEM95Q3KNT9 176 aa9□□□□□ -0.97
RTN4-211ENST00000438462 RNF130Q86XS8 419 aa9□□□□□ -0.97
RTN4-211ENST00000438462 Q8N2B8 174 aa9□□□□□ -0.97
RTN4-211ENST00000438462 TMEM99Q8N816 258 aa9□□□□□ -0.97
RTN4-211ENST00000438462 SLC7A13Q8TCU3 470 aa9□□□□□ -0.97
RTN4-211ENST00000438462 C10orf82Q8WW14 230 aa9□□□□□ -0.97
RTN4-211ENST00000438462 TMEM234Q8WY98 164 aa9□□□□□ -0.97
RTN4-211ENST00000438462 CHP1Q99653 195 aa9□□□□□ -0.97
RTN4-211ENST00000438462 ACER3Q9NUN7 267 aa9□□□□□ -0.97
RTN4-211ENST00000438462 ZNF224Q9NZL3 707 aa9□□□□□ -0.97
RTN4-211ENST00000438462 ANGPTL3Q9Y5C1 460 aa9□□□□□ -0.97
RTN4-211ENST00000438462 FAM95CA0A1B0GW59 222 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 A0A1W2PRD5 423 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 A0A1W2PRF3 423 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 A0A1W2PRM7 423 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 ZNF99A8MXY4 864 aaPredicted RBP8.99□□□□□ -0.97
RTN4-211ENST00000438462 TMEM178BH3BS89 294 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 SYNGR1O43759 233 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 UGDHO60701 494 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 CYP7B1O75881 506 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 AKR7A3O95154 331 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 CCL2P13500 99 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 APOBEC1P41238 236 aaKnown RBP8.99□□□□□ -0.97
RTN4-211ENST00000438462 SERPINB4P48594 390 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 RAB1AP62820 205 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.99□□□□□ -0.972e-6■□□□□ 8.9
RTN4-211ENST00000438462 TBX2Q13207 712 aaPredicted RBP8.99□□□□□ -0.97
RTN4-211ENST00000438462 CAMK2DQ13557 499 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 NPTX1Q15818 432 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 PRSS53Q2L4Q9 553 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 ARSJQ5FYB0 599 aaPredicted RBP8.99□□□□□ -0.97
RTN4-211ENST00000438462 PHYHD1Q5SRE7 291 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 NOXRED1Q6NXP6 359 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 CREB3L2Q70SY1 520 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 C1orf52Q8N6N3 182 aaKnown RBP8.99□□□□□ -0.97
RTN4-211ENST00000438462 COX18Q8N8Q8 333 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 CDRT4Q8N9R6 151 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 ANKK1Q8NFD2 765 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 MYDGFQ969H8 173 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 CCDC42Q96M95 316 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 AMDHD1Q96NU7 426 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 SSX3Q99909 188 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 TMEM246Q9BRR3 403 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 GLIPR2Q9H4G4 154 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 PIF1Q9H611 641 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 RNF121Q9H920 327 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 NHEJ1Q9H9Q4 299 aaPredicted RBP8.99□□□□□ -0.97
RTN4-211ENST00000438462 ZNF256Q9Y2P7 627 aaPredicted RBP8.99□□□□□ -0.97
RTN4-211ENST00000438462 ACOT9Q9Y305 439 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 DNAH2Q9P225 4427 aa8.99□□□□□ -0.97
RTN4-211ENST00000438462 A0A1B0GVY2 172 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 SUPT3HB4E1H0 165 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 EIF4E2O60573 245 aaKnown RBP8.98□□□□□ -0.97
RTN4-211ENST00000438462 SUPT3HO75486 399 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 LY86O95711 162 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 LIPFP07098 398 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 CRATP43155 626 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 CLK1P49759 484 aaKnown RBP8.98□□□□□ -0.97
RTN4-211ENST00000438462 SKP2Q13309 424 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 CDC73Q6P1J9 531 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 C4orf22Q6V702 233 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 VMO1Q7Z5L0 202 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 MAPKAPK5-AS1Q8N8E1 139 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 NPRL2Q8WTW4 380 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 IQCDQ96DY2 449 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 TECTBQ96PL2 329 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 ZNF649Q9BS31 505 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 ACTRT3Q9BYD9 372 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 MSL2Q9HCI7 577 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 SIRT7Q9NRC8 400 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 NUDT4Q9NZJ9 180 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 ZDHHC8Q9ULC8 765 aa8.98□□□□□ -0.97
RTN4-211ENST00000438462 FBP2O00757 339 aa8.97□□□□□ -0.97
RTN4-211ENST00000438462 ANKRD28O15084 1053 aa8.97□□□□□ -0.97
RTN4-211ENST00000438462 NPFFO15130 113 aa8.97□□□□□ -0.97
RTN4-211ENST00000438462 DNAJA2O60884 412 aa8.97□□□□□ -0.97
RTN4-211ENST00000438462 MFN2O95140 757 aa8.97□□□□□ -0.97
RTN4-211ENST00000438462 PRPS2P11908 318 aa8.97□□□□□ -0.97
RTN4-211ENST00000438462 MLNP12872 115 aa8.97□□□□□ -0.97
RTN4-211ENST00000438462 MPV17P39210 176 aa8.97□□□□□ -0.97
RTN4-211ENST00000438462 ARL1P40616 181 aaPredicted RBP8.97□□□□□ -0.97
RTN4-211ENST00000438462 ARF6P62330 175 aa8.97□□□□□ -0.97
RTN4-211ENST00000438462 PRB3Q04118 309 aaPredicted RBP8.97□□□□□ -0.97
RTN4-211ENST00000438462 IFT88Q13099 833 aa8.97□□□□□ -0.97
RTN4-211ENST00000438462 SGO1Q5FBB7 561 aa8.97□□□□□ -0.97
RTN4-211ENST00000438462 SPATA46Q5T0L3 261 aa8.97□□□□□ -0.97
RTN4-211ENST00000438462 TEDDM1Q5T9Z0 273 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms