RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 ACSM5Q6NUN0 579 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 USP51Q70EK9 711 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 ADGRE4PQ86SQ3 457 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 KLHDC9Q8NEP7 349 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 SLIRPQ9GZT3 109 aaKnown RBP20.78■□□□□ 0.92
TOP2B-204ENST00000435706 ISYNA1Q9NPH2 558 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 LGI1O95970 557 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 RUNX3Q13761 415 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 DPY19L2P2Q6ZN68 376 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 HSD17B11Q8NBQ5 300 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 NCDNQ9UBB6 729 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 LAMA4Q16363 1823 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 A0A1B0GWA3 101 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 LRIT2A6NDA9 550 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 VSTM5A8MXK1 200 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 HHLA1C9JL84 531 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 PMP2P02689 132 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 DBHP09172 617 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 KIR2DL3P43628 341 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 FABP5Q01469 135 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 OR9A4Q8NGU2 314 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 UFSP2Q9NUQ7 469 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 PRKRAO75569 313 aaKnown RBP20.78■□□□□ 0.92
TOP2B-204ENST00000435706 MSX1P28360 303 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 RPP30P78346 268 aaKnown RBP20.78■□□□□ 0.92
TOP2B-204ENST00000435706 POU3F1Q03052 451 aaPredicted RBP20.78■□□□□ 0.92
TOP2B-204ENST00000435706 HNRNPA1L2Q32P51 320 aaKnown RBP20.78■□□□□ 0.92
TOP2B-204ENST00000435706 TEX261Q6UWH6 196 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 KCNG3Q8TAE7 436 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 TAF9BQ9HBM6 251 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 U3KQ87 197 aa20.78■□□□□ 0.92
TOP2B-204ENST00000435706 SELENOVP59797 346 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 SSTP61278 116 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 HSF5Q4G112 596 aaPredicted RBP20.77■□□□□ 0.92
TOP2B-204ENST00000435706 GLYATL3Q5SZD4 288 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 ESPNLQ6ZVH7 1005 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 TMEM99Q8N816 258 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 MRPS28Q9Y2Q9 187 aaKnown RBP20.77■□□□□ 0.92
TOP2B-204ENST00000435706 GPR55Q9Y2T6 319 aaPredicted RBP20.77■□□□□ 0.92
TOP2B-204ENST00000435706 LTBP3Q9NS15 1303 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 TXNDC12O95881 172 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 EIF4EP06730 217 aaKnown RBP20.77■□□□□ 0.92
TOP2B-204ENST00000435706 CALCBP10092 127 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 ERVK-16P61578 105 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 XAF1Q6GPH4 301 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 HIST2H3AQ71DI3 136 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 LGALS8O00214 317 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 NTSR1P30989 418 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 REEP5Q00765 189 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 FAM57BQ71RH2 274 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 ZNF511Q8NB15 262 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 OR6M1Q8NGM8 313 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 SGK3Q96BR1 496 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 TEAD3Q99594 435 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 SELENOFO60613 162 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 CSNK1A1P48729 337 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 CLDN2P57739 230 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 USP53Q70EK8 1073 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 UCN3Q969E3 161 aa20.77■□□□□ 0.92
TOP2B-204ENST00000435706 MRPL21Q7Z2W9 205 aaKnown RBP20.77■□□□□ 0.91
TOP2B-204ENST00000435706 MUTYHQ9UIF7 546 aa20.77■□□□□ 0.91
TOP2B-204ENST00000435706 OR13C7P0DN81 318 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 EPHA2P29317 976 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 RBMS3Q6XE24 437 aaKnown RBP20.76■□□□□ 0.91
TOP2B-204ENST00000435706 METTL9Q9H1A3 318 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 B4GALT7Q9UBV7 327 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 ASB1Q9Y576 335 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 TK1P04183 234 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 SBK2P0C263 348 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 CLINT1Q14677 625 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 PLPP7Q8NBV4 271 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 RELL2Q8NC24 303 aaPredicted RBP20.76■□□□□ 0.91
TOP2B-204ENST00000435706 GJE1A6NN92 205 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 BHLHE40O14503 412 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 P2RY2P41231 377 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 YOD1Q5VVQ6 348 aaPredicted RBP20.76■□□□□ 0.91
TOP2B-204ENST00000435706 FAM111BQ6SJ93 734 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 KLHDC8BQ8IXV7 354 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 TACR3P29371 465 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 ACVR1Q04771 509 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 SLC35D3Q5M8T2 416 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 MED18Q9BUE0 208 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 PATZ1Q9HBE1 687 aaKnown RBP20.76■□□□□ 0.91
TOP2B-204ENST00000435706 SLC22A11Q9NSA0 550 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 FLVCR2Q9UPI3 526 aa20.76■□□□□ 0.91
TOP2B-204ENST00000435706 PCYT1BQ9Y5K3 369 aaPredicted RBP20.76■□□□□ 0.91
TOP2B-204ENST00000435706 SULT2B1O00204 365 aa20.75■□□□□ 0.91
TOP2B-204ENST00000435706 UBE2IP63279 158 aaKnown RBP20.75■□□□□ 0.91
TOP2B-204ENST00000435706 ZNF836Q6ZNA1 936 aa20.75■□□□□ 0.91
TOP2B-204ENST00000435706 NKAIN4Q8IVV8 208 aa20.75■□□□□ 0.91
TOP2B-204ENST00000435706 SLC22A24Q8N4F4 322 aa20.75■□□□□ 0.91
TOP2B-204ENST00000435706 IL1F10Q8WWZ1 152 aa20.75■□□□□ 0.91
TOP2B-204ENST00000435706 INSM2Q96T92 566 aaPredicted RBP20.75■□□□□ 0.91
TOP2B-204ENST00000435706 HRASLSQ9HDD0 168 aa20.75■□□□□ 0.91
TOP2B-204ENST00000435706 S100A8P05109 93 aa20.75■□□□□ 0.91
TOP2B-204ENST00000435706 PRSS36Q5K4E3 855 aa20.75■□□□□ 0.91
TOP2B-204ENST00000435706 ZNF425Q6IV72 752 aa20.75■□□□□ 0.91
TOP2B-204ENST00000435706 TIMM29Q9BSF4 260 aa20.75■□□□□ 0.91
TOP2B-204ENST00000435706 ULBP3Q9BZM4 244 aa20.75■□□□□ 0.91
TOP2B-204ENST00000435706 HLA-FP30511 346 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms