RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ZDHHC18Q9NUE0 388 aa10.39□□□□□ -0.75
SCN4A-201ENST00000435607 FAM72CH0Y354 149 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 H3BMQ9 156 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 GPRIN2O60269 458 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 UTS2O95399 124 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 BLVRBP30043 206 aaPredicted RBP10.38□□□□□ -0.75
SCN4A-201ENST00000435607 MGAT3Q09327 533 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 FAM72AQ5TYM5 149 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 FAM72DQ6L9T8 149 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 TMEM207Q6UWW9 146 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 C17orf99Q6UX52 265 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 Q6ZTK2 550 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 FAM72BQ86X60 149 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 SIMC1Q8NDZ2 872 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 C3orf58Q8NDZ4 430 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 NT5DC2Q9H857 520 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 TRAV27A0A087WT01 109 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 OR2M5A3KFT3 312 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 CPEP16870 476 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 UBE2IP63279 158 aaKnown RBP10.38□□□□□ -0.75
SCN4A-201ENST00000435607 PRDX1Q06830 199 aaKnown RBP10.38□□□□□ -0.75
SCN4A-201ENST00000435607 NHSL2Q5HYW2 709 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 C17orf107Q6ZR85 190 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 SERPINA11Q86U17 422 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 RPS19BP1Q86WX3 136 aaKnown RBP10.38□□□□□ -0.75
SCN4A-201ENST00000435607 GLB1L2Q8IW92 636 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 MENTQ9BUN1 341 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 KLF16Q9BXK1 252 aaPredicted RBP10.38□□□□□ -0.75
SCN4A-201ENST00000435607 OR52D1Q9H346 318 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 BAZ2AQ9UIF9 1905 aaKnown RBP10.38□□□□□ -0.75
SCN4A-201ENST00000435607 MEIS3P1A6NDR6 274 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 BPIFB3P59826 476 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 CEACAM7Q14002 265 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 FAM78AQ5JUQ0 283 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 ZNF836Q6ZNA1 936 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 DPPA2Q7Z7J5 298 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 TMEM130Q8N3G9 435 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 ABHD4Q8TB40 342 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 SLC35A4Q96G79 324 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 SERTM1A2A2V5 107 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 FGF3P11487 239 aaPredicted RBP10.38□□□□□ -0.75
SCN4A-201ENST00000435607 PPIAP62937 165 aaKnown RBP10.38□□□□□ -0.75
SCN4A-201ENST00000435607 ARHGAP11BQ3KRB8 267 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 CPZQ66K79 652 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 UBAC2Q8NBM4 344 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 OR2T6Q8NHC8 308 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 IL37Q9NZH6 218 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 MARCH4Q9P2E8 410 aaPredicted RBP10.38□□□□□ -0.75
SCN4A-201ENST00000435607 MRPS28Q9Y2Q9 187 aaKnown RBP10.38□□□□□ -0.75
SCN4A-201ENST00000435607 DOK2O60496 412 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 LCN6P62502 163 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 NXNL2Q5VZ03 156 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 RPL22L1Q6P5R6 122 aaKnown RBP10.38□□□□□ -0.75
SCN4A-201ENST00000435607 CNIH2Q6PI25 160 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 HSD11B1LQ7Z5J1 315 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 CPNE8Q86YQ8 564 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 SLC22A24Q8N4F4 322 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 KIR2DS1A0A191URI9 304 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 LRRC3CA6NJW4 275 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 I6L893 689 aaPredicted RBP10.38□□□□□ -0.75
SCN4A-201ENST00000435607 DFFBO76075 338 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 OPRD1P41143 372 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 KIR2DS4P43632 304 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 EMP3P54852 163 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 ERVPABLB-1P60509 514 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 KIR2DS1Q14954 304 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 MFSD12Q6NUT3 480 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 TMEM135Q86UB9 458 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 THNSL2Q86YJ6 484 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 GPR150Q8NGU9 434 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 ELP4Q96EB1 424 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 TMEM59LQ9UK28 342 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 OR52A1Q9UKL2 312 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 TMEM131LA2VDJ0 1609 aa10.38□□□□□ -0.75
SCN4A-201ENST00000435607 SPEF2Q9C093 1822 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 TMED7-TICAM2A0A0A6YYA0 188 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 F10P00742 488 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 TRIM23P36406 574 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 SNRPD2P62316 118 aaKnown RBP10.37□□□□□ -0.75
SCN4A-201ENST00000435607 SMAD2Q15796 467 aaKnown RBP10.37□□□□□ -0.75
SCN4A-201ENST00000435607 MRPL2Q5T653 305 aaKnown RBP10.37□□□□□ -0.75
SCN4A-201ENST00000435607 OR2A2Q6IF42 318 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 TMED7Q9Y3B3 224 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 SERINC4A6NH21 518 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 ARPC3O15145 178 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 PRSS56P0CW18 603 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 CLLU1OSQ5K130 101 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 PRAMEF5Q5TYX0 476 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 PRAMEF6Q5VXH4 476 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 CLEC14AQ86T13 490 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 SLC30A3Q99726 388 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 PHF7Q9BWX1 381 aaPredicted RBP10.37□□□□□ -0.75
SCN4A-201ENST00000435607 WDR76Q9H967 626 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 SOCS6O14544 535 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 EFSO43281 561 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 GPR12P47775 334 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 NOVA1P51513 510 aaKnown RBP10.37□□□□□ -0.75
SCN4A-201ENST00000435607 KEAP1Q14145 624 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 PLAG1Q6DJT9 500 aa10.37□□□□□ -0.75
SCN4A-201ENST00000435607 EGFL6Q8IUX8 553 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms