RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 NRIP3Q9NQ35 241 aa6.86□□□□□ -1.31
CPSF6-202ENST00000435070 CACNA1IQ9P0X4 2223 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 FAM86C2PA6NEL3 165 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 PIN1P1O15428 100 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 FGBP02675 491 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 APODP05090 189 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 BTF3P20290 206 aaKnown RBP6.85□□□□□ -1.31
CPSF6-202ENST00000435070 AGTR1P30556 359 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 BDH1Q02338 343 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 CDKN3Q16667 212 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 NKPD1Q17RQ9 610 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 NKAPLQ5M9Q1 402 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 PWWP2BQ6NUJ5 590 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 TPRG1Q6ZUI0 275 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.85□□□□□ -1.31
CPSF6-202ENST00000435070 GLB1L2Q8IW92 636 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 HIST1H2BAQ96A08 127 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 SLC41A3Q96GZ6 507 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF350Q9GZX5 532 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 SMCO4Q9NRQ5 59 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 C20orf141Q9NUB4 165 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 HEATR5BQ9P2D3 2071 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 A0A1B0GVT2 93 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 TMEM82A0PJX8 343 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 UBE2CO00762 179 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 CTDSPLO15194 276 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 ARG1P05089 322 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 GKN3PP0CG01 181 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 MUC1P15941 1255 aaPredicted RBP6.85□□□□□ -1.31
CPSF6-202ENST00000435070 DCDP81605 110 aaKnown RBP6.85□□□□□ -1.31
CPSF6-202ENST00000435070 RHEBQ15382 184 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 LY6G6FQ5SQ64 297 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 UQCC3Q6UW78 93 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 FRRS1Q6ZNA5 592 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 GDF7Q7Z4P5 450 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 OR1J2Q8NGS2 313 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 TM4SF18Q96CE8 201 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 USP36Q9P275 1121 aaKnown RBP6.85□□□□□ -1.31
CPSF6-202ENST00000435070 V9GY05 133 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 A0A1W2PPH5 198 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 PPP1R3DO95685 299 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 IL9P15248 144 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 SPI1P17947 270 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 NME2P22392 152 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 PRKXP51817 358 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 PDX1P52945 283 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 CST9Q5W186 159 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 CXCL17Q6UXB2 119 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF836Q6ZNA1 936 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 PPP1R3BQ86XI6 285 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 OR8D1Q8WZ84 308 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 DIO2Q92813 273 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 RBM14Q96PK6 669 aaKnown RBP6.85□□□□□ -1.31
CPSF6-202ENST00000435070 GFI1Q99684 422 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.85□□□□□ -1.312e-6■■■□□ 15.6
CPSF6-202ENST00000435070 APMAPQ9HDC9 416 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 CACNB4O00305 520 aaPredicted RBP6.85□□□□□ -1.31
CPSF6-202ENST00000435070 ADH1CP00326 375 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 OR8U8P0C7N1 319 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 ID4P47928 161 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 RIDAP52758 137 aaKnown RBP6.85□□□□□ -1.31
CPSF6-202ENST00000435070 SP3Q02447 781 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 C9orf64Q5T6V5 341 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 FAM24BQ8N5W8 94 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 THRSPQ92748 146 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 RRNAD1Q96FB5 475 aaKnown RBP6.85□□□□□ -1.31
CPSF6-202ENST00000435070 CD180Q99467 661 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 GLIPR2Q9H4G4 154 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 CREBZFQ9NS37 354 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 KNL1Q8NG31 2342 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 H7C1Q1 480 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 SLC33A1O00400 549 aaPredicted RBP6.85□□□□□ -1.31
CPSF6-202ENST00000435070 TMPRSS11DO60235 418 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 OR4E1P0C645 316 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 VAMP1P23763 118 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 RAB7AP51149 207 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 EEF1A1P68104 462 aaKnown RBP6.85□□□□□ -1.31
CPSF6-202ENST00000435070 ILF3Q12906 894 aaKnown RBP eCLIP6.85□□□□□ -1.311e-6■■■■□ 22.3
CPSF6-202ENST00000435070 IL10RAQ13651 578 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 EEF1A1P5Q5VTE0 462 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 RSPO2Q6UXX9 243 aaPredicted RBP6.85□□□□□ -1.31
CPSF6-202ENST00000435070 DMBX1Q8NFW5 382 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 OR6K6Q8NGW6 343 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 OR4K13Q8NH42 304 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 KISS1RQ969F8 398 aaPredicted RBP6.85□□□□□ -1.31
CPSF6-202ENST00000435070 AKR1E2Q96JD6 320 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 EFCAB11Q9BUY7 163 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 CLEC4EQ9ULY5 219 aa6.85□□□□□ -1.31
CPSF6-202ENST00000435070 RNF222A6NCQ9 220 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 GGT3PA6NGU5 568 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 ZNF891A8MT65 544 aaPredicted RBP6.84□□□□□ -1.31
CPSF6-202ENST00000435070 VEGFDO43915 354 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 RAD1O60671 282 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 THY1P04216 161 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 RHOP08100 348 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 PGAM2P15259 253 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 DPP4P27487 766 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 CASRP41180 1078 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 TAS2R43P59537 309 aa6.84□□□□□ -1.31
CPSF6-202ENST00000435070 SIRPAP78324 504 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms