RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 NRIP3Q9NQ35 241 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 HINT3Q9NQE9 182 aaKnown RBP10.11□□□□□ -0.79
LINC00539-203ENST00000434601 PAK1IP1Q9NWT1 392 aaPredicted RBP10.11□□□□□ -0.79
LINC00539-203ENST00000434601 TAS2R5Q9NYW4 299 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 PSORS1C1Q9UIG5 152 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 KLHL21Q9UJP4 597 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 ADAM18Q9Y3Q7 739 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 CSAG2Q9Y5P2 127 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 IER3IP1Q9Y5U9 82 aa10.11□□□□□ -0.79
LINC00539-203ENST00000434601 TRAV17A0A0B4J275 112 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 TEX13CA0A0J9YWL9 993 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 A0A1W2PNR3 127 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 A0A1W2PNV4 684 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 SNTNA6NMZ2 147 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 FAM166BA8MTA8 275 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 C11orf98E9PRG8 122 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 LINC01387J3KSC0 135 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 M0R3G1 203 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 PLPP3O14495 311 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 IMPA2O14732 288 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 PRODHO43272 600 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 RNF13O43567 381 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 IDH3BO43837 385 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 MRPS14O60783 128 aaKnown RBP10.1□□□□□ -0.79
LINC00539-203ENST00000434601 PMS2P2O95744 297 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 CLPTM1O96005 669 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 IGHMP01871 453 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 OPN1LWP04000 364 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 F13BP05160 661 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 DBTP11182 482 aaKnown RBP10.1□□□□□ -0.79
LINC00539-203ENST00000434601 HIST1H1CP16403 213 aaKnown RBP10.1□□□□□ -0.79
LINC00539-203ENST00000434601 PAICSP22234 425 aaKnown RBP10.1□□□□□ -0.79
LINC00539-203ENST00000434601 COL8A1P27658 744 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 SDHAP31040 664 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 MAGEA5P43359 124 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.1□□□□□ -0.79
LINC00539-203ENST00000434601 PUDPQ08623 228 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 ZP4Q12836 540 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 CRMP1Q14194 572 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 EMC4Q5J8M3 183 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 AADACL4Q5VUY2 407 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 NXNL2Q5VZ03 156 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 GPR139Q6DWJ6 353 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 AHSA2Q719I0 299 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 H1FNTQ75WM6 255 aaPredicted RBP10.1□□□□□ -0.79
LINC00539-203ENST00000434601 FAM122BQ7Z309 247 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 BCDIN3DQ7Z5W3 292 aaKnown RBP10.1□□□□□ -0.79
LINC00539-203ENST00000434601 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.1□□□□□ -0.79
LINC00539-203ENST00000434601 SLC22A16Q86VW1 577 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 GID4Q8IVV7 300 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 FAM98AQ8NCA5 519 aaKnown RBP10.1□□□□□ -0.79
LINC00539-203ENST00000434601 SDR9C7Q8NEX9 313 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 ANKK1Q8NFD2 765 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 SGCDQ92629 289 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 TSPAN32Q96QS1 320 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 RHNO1Q9BSD3 238 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 AMBNQ9NP70 447 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 INIPQ9NRY2 104 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 FKBP14Q9NWM8 211 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 QPCTLQ9NXS2 382 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 CNOT2Q9NZN8 540 aaKnown RBP10.1□□□□□ -0.79
LINC00539-203ENST00000434601 TRAPPC4Q9Y296 219 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 B3GALT5Q9Y2C3 310 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 RPL36Q9Y3U8 105 aaKnown RBP10.1□□□□□ -0.79
LINC00539-203ENST00000434601 SNX5Q9Y5X3 404 aa10.1□□□□□ -0.79
LINC00539-203ENST00000434601 APCP25054 2843 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 EFCAB10A6NFE3 127 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 FAM183AA6NL82 134 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 CLCA1A8K7I4 914 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 PTGES3LE9PB15 166 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 PRR23D1E9PI22 279 aaPredicted RBP10.09□□□□□ -0.79
LINC00539-203ENST00000434601 SULT2B1O00204 365 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 RGS10O43665 173 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 AKR7A3O95154 331 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 TXNDC12O95881 172 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 HTR1AP08908 422 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 PRR23D2P0DMB1 279 aaPredicted RBP10.09□□□□□ -0.79
LINC00539-203ENST00000434601 PIPP12273 146 aaPredicted RBP10.09□□□□□ -0.79
LINC00539-203ENST00000434601 EDN3P14138 238 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 POU3F2P20265 443 aaPredicted RBP10.09□□□□□ -0.79
LINC00539-203ENST00000434601 AHCYP23526 432 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 ACVR2AP27037 513 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 DIO1P49895 249 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 CDH11P55287 796 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 GFRA1P56159 465 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 PPIAP62937 165 aaKnown RBP10.09□□□□□ -0.79
LINC00539-203ENST00000434601 SLC35A1P78382 337 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 ITGADQ13349 1161 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 KRR1Q13601 381 aaKnown RBP10.09□□□□□ -0.79
LINC00539-203ENST00000434601 NIPAL3Q6P499 406 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 PLBD1Q6P4A8 553 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 TMPPEQ6ZT21 453 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 CPOQ8IVL8 374 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 FAM109AQ8N4B1 249 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 SLC37A3Q8NCC5 494 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 OR52E2Q8NGJ4 325 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 OR4K13Q8NH42 304 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 GGHQ92820 318 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 RFKQ969G6 155 aa10.09□□□□□ -0.79
LINC00539-203ENST00000434601 MYDGFQ969H8 173 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms