RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 ADH7P40394 386 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 SRP9P49458 86 aaKnown RBP7.95□□□□□ -1.14
GABPB1-205ENST00000429662 SRP54P61011 504 aaKnown RBP7.95□□□□□ -1.14
GABPB1-205ENST00000429662 RPS11P62280 158 aaKnown RBP eCLIP7.95□□□□□ -1.14
GABPB1-205ENST00000429662 SNRPD2P62316 118 aaKnown RBP7.95□□□□□ -1.14
GABPB1-205ENST00000429662 DGCR2P98153 550 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 STX4Q12846 297 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 CAMK2DQ13557 499 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 FHL1Q13642 323 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 FAM27D1Q5T7N8 215 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 OLFML2AQ68BL7 652 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 SIGIRRQ6IA17 410 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 ARMC6Q6NXE6 501 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 KIAA1324Q6UXG2 1013 aaKnown RBP7.95□□□□□ -1.14
GABPB1-205ENST00000429662 ELMOD2Q8IZ81 293 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 OR4N4Q8N0Y3 316 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 SPICQ8N5J4 248 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 CYB561A3Q8NBI2 242 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 NPEPL1Q8NDH3 523 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 ZNF680Q8NEM1 530 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 OR4K13Q8NH42 304 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 OR10G6Q8NH81 332 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 GIMAP1Q8WWP7 306 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 ASB13Q8WXK3 278 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 FAM3CQ92520 227 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 ZMYND19Q96E35 227 aaPredicted RBP7.95□□□□□ -1.14
GABPB1-205ENST00000429662 SIPA1Q96FS4 1042 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 PEX11GQ96HA9 241 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 CITED4Q96RK1 184 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 DDOQ99489 341 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 UTP23Q9BRU9 249 aaKnown RBP7.95□□□□□ -1.14
GABPB1-205ENST00000429662 ZNF436Q9C0F3 470 aaPredicted RBP7.95□□□□□ -1.14
GABPB1-205ENST00000429662 FBXO34Q9NWN3 711 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 SLCO1C1Q9NYB5 712 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 USP36Q9P275 1121 aaKnown RBP7.95□□□□□ -1.14
GABPB1-205ENST00000429662 PRODH2Q9UF12 536 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 UBQLN2Q9UHD9 624 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 GNG8Q9UK08 70 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 NUP50Q9UKX7 468 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 MRPS17Q9Y2R5 130 aaKnown RBP7.95□□□□□ -1.14
GABPB1-205ENST00000429662 MRPS7Q9Y2R9 242 aaKnown RBP7.95□□□□□ -1.14
GABPB1-205ENST00000429662 V9GY05 133 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 TRPM6Q9BX84 2022 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 COL6A6A6NMZ7 2263 aa7.95□□□□□ -1.14
GABPB1-205ENST00000429662 NPIPA5A0A0B4J1W7 369 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 POM121BA6NF01 834 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 SERINC4A6NH21 518 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 NPIPA7E9PJI5 369 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 SMLR1H3BR10 107 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 ACOT7O00154 380 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 ZNF593O00488 134 aaPredicted RBP7.94□□□□□ -1.14
GABPB1-205ENST00000429662 CLDN4O14493 209 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 SRPX2O60687 465 aaPredicted RBP7.94□□□□□ -1.14
GABPB1-205ENST00000429662 CTNSO60931 367 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 EGFP01133 1207 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 CT62P0C5K7 136 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 NPIPA8P0DM63 369 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 CLUP10909 449 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 RNH1P13489 461 aaKnown RBP7.94□□□□□ -1.14
GABPB1-205ENST00000429662 HOXB2P14652 356 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 SPI1P17947 270 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 S1PR1P21453 382 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 GRK6P43250 576 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 RABIFP47224 123 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 CENPAP49450 140 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 EMDP50402 254 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 MECP2P51608 486 aaKnown RBP7.94□□□□□ -1.14
GABPB1-205ENST00000429662 ART1P52961 327 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 SEC13P55735 322 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 UBE2IP63279 158 aaKnown RBP7.94□□□□□ -1.14
GABPB1-205ENST00000429662 IGLV3-21P80748 117 aaPredicted RBP7.94□□□□□ -1.14
GABPB1-205ENST00000429662 PSG6Q00889 435 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 DHODHQ02127 395 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 ID2Q02363 134 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 SNTA1Q13424 505 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 CCINQ13939 588 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 GPR18Q14330 331 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 EXOSC7Q15024 291 aaKnown RBP7.94□□□□□ -1.14
GABPB1-205ENST00000429662 GRK1Q15835 563 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.94□□□□□ -1.14
GABPB1-205ENST00000429662 TMEM196Q5HYL7 178 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 RPTNQ6XPR3 784 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 IDO2Q6ZQW0 420 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 LINGO2Q7L985 606 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 SSX6Q7RTT6 188 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 SLC16A9Q7RTY1 509 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 RD3Q7Z3Z2 195 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 JAZF1Q86VZ6 243 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 CMTM4Q8IZR5 234 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 ZNF614Q8N883 585 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 AVL9Q8NBF6 648 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 UXS1Q8NBZ7 420 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 SDR9C7Q8NEX9 313 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 LGALS14Q8TCE9 139 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 GPBAR1Q8TDU6 330 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 HSD17B8Q92506 261 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 RIT1Q92963 219 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 BMFQ96LC9 184 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 HSPA12BQ96MM6 686 aa7.94□□□□□ -1.14
GABPB1-205ENST00000429662 VSTM2LQ96N03 204 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms