RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 PNO1Q9NRX1 252 aaKnown RBP11.4□□□□□ -0.58
CDH3-202ENST00000429102 CGGBP1Q9UFW8 167 aaPredicted RBP11.4□□□□□ -0.58
CDH3-202ENST00000429102 PLEKHA6Q9Y2H5 1048 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 TRANK1O15050 2925 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 B4DGG1 531 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 OPN1LWP04000 364 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 OR2T7P0C7T2 308 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 GRK6P43250 576 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 ACTC1P68032 377 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 ACTA1P68133 377 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 MEP1BQ16820 701 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 PXKQ7Z7A4 578 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 LSMEM1Q8N8F7 131 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 OR2T27Q8NH04 317 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 RSC1A1Q92681 617 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 OR8D2Q9GZM6 311 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 TMEM185BQ9H7F4 350 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 POMT2Q9UKY4 750 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 ZNF281Q9Y2X9 895 aa11.4□□□□□ -0.58
CDH3-202ENST00000429102 FITM1A5D6W6 292 aa11.4□□□□□ -0.59
CDH3-202ENST00000429102 C2orf72A6NCS6 295 aa11.4□□□□□ -0.59
CDH3-202ENST00000429102 URADA6NGE7 173 aa11.4□□□□□ -0.59
CDH3-202ENST00000429102 PTP4A3O75365 173 aa11.4□□□□□ -0.59
CDH3-202ENST00000429102 ITGA10O75578 1167 aa11.4□□□□□ -0.59
CDH3-202ENST00000429102 CD3DP04234 171 aa11.4□□□□□ -0.59
CDH3-202ENST00000429102 LINC00271P0C7V0 271 aa11.4□□□□□ -0.59
CDH3-202ENST00000429102 HOXB2P14652 356 aa11.4□□□□□ -0.59
CDH3-202ENST00000429102 METTL11BQ5VVY1 283 aa11.4□□□□□ -0.59
CDH3-202ENST00000429102 RPL22L1Q6P5R6 122 aaKnown RBP11.4□□□□□ -0.59
CDH3-202ENST00000429102 STAC2Q6ZMT1 411 aa11.4□□□□□ -0.59
CDH3-202ENST00000429102 TMPRSS11FQ6ZWK6 438 aa11.4□□□□□ -0.59
CDH3-202ENST00000429102 TRIM2Q9C040 744 aa11.4□□□□□ -0.59
CDH3-202ENST00000429102 PCDHGA9Q9Y5G4 932 aaKnown RBP11.4□□□□□ -0.59
CDH3-202ENST00000429102 A0A0B4J2E0 115 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 A0A1B0GX12 115 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 LINC00862A6NCI5 91 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 PDCD5O14737 125 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 OR6A2O95222 327 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 FGF19O95750 216 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 AGR2O95994 175 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 VSIG10L2P0DP72 767 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 ADRA2CP18825 462 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 MNX1P50219 401 aaPredicted RBP11.39□□□□□ -0.59
CDH3-202ENST00000429102 PSG6Q00889 435 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 FCRL6Q6DN72 434 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 ATRAIDQ6UW56 229 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 PARM1Q6UWI2 310 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 RGP1Q92546 391 aaPredicted RBP11.39□□□□□ -0.59
CDH3-202ENST00000429102 FGF14Q92915 247 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 FBXW5Q969U6 566 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 DIABLOQ9NR28 239 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 OIP5O43482 229 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 BRINP1O60477 761 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 SPARCP09486 303 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 RRASP10301 218 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 PTBP1P26599 531 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDH3-202ENST00000429102 ADPRHP54922 357 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 H2BFSP57053 126 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 BIKQ13323 160 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 RIN1Q13671 783 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 MFSD13AQ14CX5 517 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 STK11Q15831 433 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 ARHGAP40Q5TG30 622 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 PRAMEF17Q5VTA0 474 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 JAGN1Q8N5M9 183 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 OR4C16Q8NGL9 310 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 HERVK_113Q902F9 699 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 AMELYQ99218 206 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 GPN1Q9HCN4 374 aaPredicted RBP11.39□□□□□ -0.59
CDH3-202ENST00000429102 C14orf105Q9NVL8 296 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 LINC01553A4QN01 128 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 RP2O75695 350 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 CBX7O95931 251 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 EGFP01133 1207 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 ZNF28P17035 718 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 ZNF10P21506 573 aaPredicted RBP11.39□□□□□ -0.59
CDH3-202ENST00000429102 ZNF776Q68DI1 518 aaPredicted RBP11.39□□□□□ -0.59
CDH3-202ENST00000429102 OR7E24Q6IFN5 339 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 PWWP2BQ6NUJ5 590 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 SHISA6Q6ZSJ9 500 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 PRSS42Q7Z5A4 293 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 RNF113BQ8IZP6 322 aaKnown RBP11.39□□□□□ -0.59
CDH3-202ENST00000429102 ZNF454Q8N9F8 522 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 CHST4Q8NCG5 386 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 MMABQ96EY8 250 aaPredicted RBP11.39□□□□□ -0.59
CDH3-202ENST00000429102 DMRTA2Q96SC8 542 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 COPZ2Q9P299 210 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 NUP50Q9UKX7 468 aa11.39□□□□□ -0.59
CDH3-202ENST00000429102 hCG_1807616A0A1W2PRN6 198 aa11.38□□□□□ -0.59
CDH3-202ENST00000429102 G3V3Q6 166 aa11.38□□□□□ -0.59
CDH3-202ENST00000429102 KLF8O95600 359 aaPredicted RBP11.38□□□□□ -0.59
CDH3-202ENST00000429102 C5AR1P21730 350 aa11.38□□□□□ -0.59
CDH3-202ENST00000429102 MNDAP41218 407 aa11.38□□□□□ -0.59
CDH3-202ENST00000429102 ACAA2P42765 397 aaKnown RBP11.38□□□□□ -0.59
CDH3-202ENST00000429102 ACTA2P62736 377 aa11.38□□□□□ -0.59
CDH3-202ENST00000429102 ACTG2P63267 376 aa11.38□□□□□ -0.59
CDH3-202ENST00000429102 ETFDHQ16134 617 aa11.38□□□□□ -0.59
CDH3-202ENST00000429102 PRICKLE4Q2TBC4 344 aa11.38□□□□□ -0.59
CDH3-202ENST00000429102 ARMC6Q6NXE6 501 aa11.38□□□□□ -0.59
CDH3-202ENST00000429102 USP53Q70EK8 1073 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms