RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 RAP1AP62834 184 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 MYBPC1Q00872 1141 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 IL5RAQ01344 420 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZP4Q12836 540 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 KEAP1Q14145 624 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 SLC17A1Q14916 467 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 RNPS1Q15287 305 aaKnown RBP7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 POU4F3Q15319 338 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 SNAPC1Q16533 368 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 MS4A18Q3C1V0 323 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 EMC4Q5J8M3 183 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 SLX4IPQ5VYV7 408 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 CARD17Q5XLA6 110 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 FAM205BPQ63HN1 556 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 NSUN5P2Q63ZY6 315 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 GPR139Q6DWJ6 353 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 B3GNT6Q6ZMB0 384 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 SLC35D2Q76EJ3 337 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 GCNT2Q8N0V5 402 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 DEPDC4Q8N2C3 294 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 LNX2Q8N448 690 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 LRRC75AQ8NAA5 344 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 ST6GALNAC3Q8NDV1 305 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 SETD9Q8NE22 299 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 OR4K13Q8NH42 304 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 TFAP2CQ92754 450 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 WNT2BQ93097 391 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 OTULINQ96BN8 352 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 Q96M85 177 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 BBC3Q96PG8 261 aaPredicted RBP7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 PITX2Q99697 317 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 TM9SF2Q99805 663 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 SF3B5Q9BWJ5 86 aaKnown RBP7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 TP63Q9H3D4 680 aaPredicted RBP7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 TXNIPQ9H3M7 391 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 NRIP3Q9NQ35 241 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 MED29Q9NX70 200 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 TVP23BQ9NYZ1 205 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 CLCF1Q9UBD9 225 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 TINAGQ9UJW2 476 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 ATMQ13315 3056 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 NINQ8N4C6 2090 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 HEATR5AQ86XA9 2040 aa7.05□□□□□ -1.28
HMGA1P4-201ENST00000428643 SETXQ7Z333 2677 aaKnown RBP7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 BOD1L1Q8NFC6 3051 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 IGKV3D-15A0A087WSY6 115 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 TRGV8A0A0C4DH27 118 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 LOC102725191A0A1B0GVB3 256 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 NPIPB13A6NJU9 1138 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 CD8B2A6NJW9 211 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 EIF4E1BA6NMX2 242 aaKnown RBP7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF726A6NNF4 738 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 NPIPB4C9JG80 1138 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 H7C1C5 153 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 ARPC3O15145 178 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 SURF4O15260 269 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 SLC16A6O15403 523 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 ARHGEF9O43307 516 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 IDH3BO43837 385 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 IGHG1P01857 330 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 IGHMP01871 453 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 PRB1P04280 392 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 HOXD4P09016 255 aaPredicted RBP7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 GNAO1P09471 354 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 HIST1H1CP16403 213 aaKnown RBP7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 PAICSP22234 425 aaKnown RBP7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 ACVR1BP36896 505 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 PCYT1AP49585 367 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 SLC16A1P53985 500 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 CLRN1P58418 232 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 LCN6P62502 163 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 SIRPAP78324 504 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 ADARB1P78563 741 aaKnown RBP7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 CDK5Q00535 292 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 CD47Q08722 323 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 IL18R1Q13478 541 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 MESTQ5EB52 335 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 TMEM201Q5SNT2 666 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 C12orf73Q69YU5 71 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 GTF2IRD2BQ6EKJ0 949 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 OR2A2Q6IF42 318 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 ACSM5Q6NUN0 579 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 CREB3L2Q70SY1 520 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 AAED1Q7RTV5 226 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 FAM122BQ7Z309 247 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 ADGRE4PQ86SQ3 457 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 ADCK1Q86TW2 530 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 GTF2IRD2Q86UP8 949 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 DOLPP1Q86YN1 238 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 TUSC5Q8IXB3 177 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 C8orf59Q8N0T1 100 aaPredicted RBP7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 ARIH2OSQ8N7S6 290 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 TCEANCQ8N8B7 351 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 CNEP1R1Q8N9A8 125 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 C9orf106Q8NAJ2 232 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 SDR9C7Q8NEX9 313 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 OR52E2Q8NGJ4 325 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 ZNF519Q8TB69 540 aa7.04□□□□□ -1.28
HMGA1P4-201ENST00000428643 ASB10Q8WXI3 467 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms