RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 TSPYL5Q86VY4 417 aaPredicted RBP16.02■□□□□ 0.16
PSPC1-202ENST00000427943 SCAIQ8N9R8 606 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 FBXO17Q96EF6 278 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 TXNDC15Q96J42 360 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 RHNO1Q9BSD3 238 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 NANOGQ9H9S0 305 aa16.02■□□□□ 0.16
PSPC1-202ENST00000427943 MRPL39Q9NYK5 338 aaKnown RBP16.02■□□□□ 0.16
PSPC1-202ENST00000427943 LOC102725191A0A1B0GVB3 256 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 ZNF503-AS2A6NEH8 195 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 C11orf98E9PRG8 122 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 FXYD1O00168 92 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 LYPD3O95274 346 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 CRYAAP02489 173 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 THY1P04216 161 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 CALCRP30988 508 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 ARFIP2P53365 341 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 NAAAQ02083 359 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 CHRNB3Q05901 458 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 KLF10Q13118 480 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 INTS11Q5TA45 600 aaKnown RBP16.01■□□□□ 0.15
PSPC1-202ENST00000427943 REP15Q6BDI9 236 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 VHLLQ6RSH7 139 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 ZNF525Q8N782 197 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 ADAMTS16Q8TE57 1224 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 ZNF317Q96PQ6 595 aaPredicted RBP16.01■□□□□ 0.15
PSPC1-202ENST00000427943 KATNB1Q9BVA0 655 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 ZNF446Q9NWS9 450 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 CRNNQ9UBG3 495 aaPredicted RBP16.01■□□□□ 0.15
PSPC1-202ENST00000427943 SLC7A7Q9UM01 511 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 USP22Q9UPT9 525 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 NOX1Q9Y5S8 564 aa16.01■□□□□ 0.15
PSPC1-202ENST00000427943 SONP18583 2426 aaKnown RBP16.01■□□□□ 0.15
PSPC1-202ENST00000427943 SLC35F4A4IF30 521 aa16■□□□□ 0.15
PSPC1-202ENST00000427943 KPNA4O00629 521 aaPredicted RBP16■□□□□ 0.15
PSPC1-202ENST00000427943 PLPP3O14495 311 aa16■□□□□ 0.15
PSPC1-202ENST00000427943 MRASO14807 208 aa16■□□□□ 0.15
PSPC1-202ENST00000427943 LY6HO94772 140 aa16■□□□□ 0.15
PSPC1-202ENST00000427943 IGLV1-44P01699 117 aa16■□□□□ 0.15
PSPC1-202ENST00000427943 AHCYP23526 432 aa16■□□□□ 0.15
PSPC1-202ENST00000427943 CAPZA2P47755 286 aa16■□□□□ 0.15
PSPC1-202ENST00000427943 IDH3GP51553 393 aaPredicted RBP16■□□□□ 0.15
PSPC1-202ENST00000427943 NPRL3Q12980 569 aa16■□□□□ 0.15
PSPC1-202ENST00000427943 CAMK2DQ13557 499 aa16■□□□□ 0.15
PSPC1-202ENST00000427943 CYLC2Q14093 348 aaPredicted RBP16■□□□□ 0.15
PSPC1-202ENST00000427943 MMEL1Q495T6 779 aa16■□□□□ 0.15
PSPC1-202ENST00000427943 CLEC2AQ6UVW9 174 aa16■□□□□ 0.15
PSPC1-202ENST00000427943 LINC00114Q6XXX2 140 aa16■□□□□ 0.15
PSPC1-202ENST00000427943 C20orf196Q8IYI0 205 aa16■□□□□ 0.15
PSPC1-202ENST00000427943 ANKK1Q8NFD2 765 aa16■□□□□ 0.15
PSPC1-202ENST00000427943 OR5J2Q8NH18 312 aa16■□□□□ 0.15
PSPC1-202ENST00000427943 LRRC58Q96CX6 371 aa16■□□□□ 0.15
PSPC1-202ENST00000427943 TRAPPC13A5PLN9 417 aa15.99■□□□□ 0.15
PSPC1-202ENST00000427943 ZNF99A8MXY4 864 aaPredicted RBP15.99■□□□□ 0.15
PSPC1-202ENST00000427943 CH25HO95992 272 aa15.99■□□□□ 0.15
PSPC1-202ENST00000427943 MT-ATP6P00846 226 aa15.99■□□□□ 0.15
PSPC1-202ENST00000427943 IGKV3-15P01624 115 aa15.99■□□□□ 0.15
PSPC1-202ENST00000427943 VIMP08670 466 aaKnown RBP15.99■□□□□ 0.15
PSPC1-202ENST00000427943 ADORA3P0DMS8 318 aa15.99■□□□□ 0.15
PSPC1-202ENST00000427943 HOXB1P14653 301 aaPredicted RBP15.99■□□□□ 0.15
PSPC1-202ENST00000427943 TNFRSF1BP20333 461 aa15.99■□□□□ 0.15
PSPC1-202ENST00000427943 MST1LQ2TV78 715 aa15.99■□□□□ 0.15
PSPC1-202ENST00000427943 TTC33Q6PID6 262 aaPredicted RBP15.99■□□□□ 0.15
PSPC1-202ENST00000427943 CCDC80Q76M96 950 aa15.99■□□□□ 0.15
PSPC1-202ENST00000427943 MDP1Q86V88 176 aa15.99■□□□□ 0.15
PSPC1-202ENST00000427943 SNX32Q86XE0 403 aa15.99■□□□□ 0.15
PSPC1-202ENST00000427943 PRIMA1Q86XR5 153 aa15.99■□□□□ 0.15
PSPC1-202ENST00000427943 ECSITQ9BQ95 431 aa15.99■□□□□ 0.15
PSPC1-202ENST00000427943 SAR1AQ9NR31 198 aa15.99■□□□□ 0.15
PSPC1-202ENST00000427943 CA10Q9NS85 328 aa15.99■□□□□ 0.15
PSPC1-202ENST00000427943 PMF1-BGLAPU3KQ54 211 aa15.99■□□□□ 0.15
PSPC1-202ENST00000427943 JMJD1CQ15652 2540 aa15.99■□□□□ 0.15
PSPC1-202ENST00000427943 A0A096LNT2 108 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 TP53P04637 393 aaPredicted RBP15.98■□□□□ 0.15
PSPC1-202ENST00000427943 BMP4P12644 408 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 CBR1P16152 277 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 PAX7P23759 505 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 BIDP55957 195 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 GUCY1A3Q02108 690 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 ZNF74Q16587 644 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 SWI5Q1ZZU3 235 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 C3orf36Q3SXR2 165 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 NHLRC1Q6VVB1 395 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 CALHM3Q86XJ0 350 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 LRRC17Q8N6Y2 441 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 OR10H5Q8NGA6 315 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 OR8J3Q8NGG0 315 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 OR6N1Q8NGY5 312 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 SORCS2Q96PQ0 1159 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 ULBP2Q9BZM5 246 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 B3GAT2Q9NPZ5 323 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 SH3GLB1Q9Y371 365 aa15.98■□□□□ 0.15
PSPC1-202ENST00000427943 LOC100653049A0A140TA62 436 aa15.97■□□□□ 0.15
PSPC1-202ENST00000427943 ZNF726A6NNF4 738 aa15.97■□□□□ 0.15
PSPC1-202ENST00000427943 BBIP1A8MTZ0 92 aa15.97■□□□□ 0.15
PSPC1-202ENST00000427943 GPRIN2O60269 458 aa15.97■□□□□ 0.15
PSPC1-202ENST00000427943 SHOX2O60902 331 aaPredicted RBP15.97■□□□□ 0.15
PSPC1-202ENST00000427943 KRT34O76011 436 aa15.97■□□□□ 0.15
PSPC1-202ENST00000427943 OR6A2O95222 327 aa15.97■□□□□ 0.15
PSPC1-202ENST00000427943 IFNGR1P15260 489 aa15.97■□□□□ 0.15
PSPC1-202ENST00000427943 B4GALT1P15291 398 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms