RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 KDM3BQ7LBC6 1761 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 OVOS2A0A0J9YW53 1432 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 OVOS2Q6IE36 1432 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 CRYBG1Q9Y4K1 1723 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 TRAV26-1A0A087WT03 109 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 NSG1A0A0A6YYJ2 146 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 GJE1A6NN92 205 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 LOC110117498-PIK3R3F6TDL0 507 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 GFYI3L273 518 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 AGPAT2O15120 278 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 ZNF861PO60384 105 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 TOM1O60784 492 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 RAMP3O60896 148 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 SPAG6O75602 509 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 IGHDP01880 384 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 MGMTP16455 207 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 IL12AP29459 219 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 FMO3P31513 532 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 PTGDSP41222 190 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 GLP1RP43220 463 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 QARSP47897 775 aaKnown RBP1.67□□□□□ -2.14
PTPRC-208ENST00000427110 CCT3P49368 545 aaKnown RBP1.67□□□□□ -2.14
PTPRC-208ENST00000427110 ARRB1P49407 418 aaPredicted RBP1.67□□□□□ -2.14
PTPRC-208ENST00000427110 DUSP3P51452 185 aaPredicted RBP1.67□□□□□ -2.14
PTPRC-208ENST00000427110 ARFIP1P53367 373 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 NUP107P57740 925 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 TAS2R19P59542 299 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 KLRB1Q12918 225 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 CHIT1Q13231 466 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 PLD1Q13393 1074 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 GPM6BQ13491 265 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 GRB7Q14451 532 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 ATP6AP1Q15904 470 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 DUSP7Q16829 419 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 IMMTQ16891 758 aaKnown RBP1.67□□□□□ -2.14
PTPRC-208ENST00000427110 MICBQ29980 383 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 KLHL38Q2WGJ6 581 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 BOLA3Q53S33 107 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 SFT2D3Q587I9 215 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 KLF17Q5JT82 389 aaPredicted RBP1.67□□□□□ -2.14
PTPRC-208ENST00000427110 C1orf100Q5SVJ3 147 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 OR2G6Q5TZ20 316 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 OR4F3Q6IEY1 312 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 C11orf71Q6IPW1 123 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 TMIGD1Q6UXZ0 262 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 CCDC71LQ8N9Z2 235 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 FNDC5Q8NAU1 212 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 BHLHE23Q8NDY6 225 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 CATSPER1Q8NEC5 780 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 OR52H1Q8NGJ2 320 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 OR51S1Q8NGJ8 323 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 OR5D13Q8NGL4 314 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 MAGEE2Q8TD90 523 aaPredicted RBP1.67□□□□□ -2.14
PTPRC-208ENST00000427110 RDH5Q92781 318 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 PAGE5Q96GU1 130 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 ZNF641Q96N77 438 aaPredicted RBP1.67□□□□□ -2.14
PTPRC-208ENST00000427110 KCNA7Q96RP8 456 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 MBOAT4Q96T53 435 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 P2RY13Q9BPV8 354 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 RASL11BQ9BPW5 248 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 MRPL45Q9BRJ2 306 aaKnown RBP1.67□□□□□ -2.14
PTPRC-208ENST00000427110 SLC39A3Q9BRY0 314 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 CAPS2Q9BXY5 557 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 CHMP4BQ9H444 224 aaKnown RBP1.67□□□□□ -2.14
PTPRC-208ENST00000427110 ADAM28Q9UKQ2 775 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 DDX19BQ9UMR2 479 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 PIGLQ9Y2B2 252 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 KIAA0232Q92628 1395 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 TMEM2Q9UHN6 1383 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 ADAMTSL3P82987 1691 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 ADAMTS7Q9UKP4 1686 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 CAMTA1Q9Y6Y1 1673 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 RGPD5Q99666 1765 aa1.67□□□□□ -2.14
PTPRC-208ENST00000427110 TTC21AQ8NDW8 1320 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 ANKARQ7Z5J8 1434 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 TRPM3Q9HCF6 1732 aaPredicted RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 TCHHQ07283 1943 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 IGKV1D-8A0A087WSZ0 117 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 A0A1B0GVL5 298 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 CLRN2A0PK11 232 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 RBMY1BA6NDE4 496 aaKnown RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 RBMY1EA6NEQ0 496 aaKnown RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 E9PBE3 544 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 RIPK2O43353 540 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 HCRTR1O43613 425 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 TIMM8AO60220 97 aaPredicted RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 NPIPB7O75200 414 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 TNFSF13O75888 250 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 INSP01308 110 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 IL1BP01584 269 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 IGHG4P01861 327 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 RBMY1DP0C7P1 496 aaKnown RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 RBMY1A1P0DJD3 496 aaKnown RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 NPR2P20594 1047 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 CCNCP24863 283 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 KIR2DS4P43632 304 aa1.66□□□□□ -2.14
PTPRC-208ENST00000427110 TNNT2P45379 298 aaPredicted RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 CEBPDP49716 269 aaPredicted RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 SH3BGRP55822 239 aaPredicted RBP1.66□□□□□ -2.14
PTPRC-208ENST00000427110 UBE2HP62256 183 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms