RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 OR2M2Q96R28 347 aa13.99□□□□□ -0.17
COL18A1-205ENST00000423214 CCDC28BQ9BUN5 200 aa13.99□□□□□ -0.17
COL18A1-205ENST00000423214 SPATA5L1Q9BVQ7 753 aa13.99□□□□□ -0.17
COL18A1-205ENST00000423214 B3GAT2Q9NPZ5 323 aa13.99□□□□□ -0.17
COL18A1-205ENST00000423214 CCDC167Q9P0B6 97 aa13.99□□□□□ -0.17
COL18A1-205ENST00000423214 TESQ9UGI8 421 aaKnown RBP13.99□□□□□ -0.17
COL18A1-205ENST00000423214 ANK2Q01484 3957 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 SH3PXD2BA1X283 911 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 LRP5LA4QPB2 252 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 M0R3G1 203 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 TRAF3IP2O43734 574 aaPredicted RBP13.98□□□□□ -0.17
COL18A1-205ENST00000423214 FZD7O75084 574 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 BMP2P12643 396 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 APEX1P27695 318 aaKnown RBP13.98□□□□□ -0.17
COL18A1-205ENST00000423214 RGS8P57771 180 aaPredicted RBP13.98□□□□□ -0.17
COL18A1-205ENST00000423214 POU3F1Q03052 451 aaPredicted RBP13.98□□□□□ -0.17
COL18A1-205ENST00000423214 HGFACQ04756 655 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 ADRM1Q16186 407 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 CR1LQ2VPA4 569 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 CARD17Q5XLA6 110 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 KRT80Q6KB66 452 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 H1FNTQ75WM6 255 aaPredicted RBP13.98□□□□□ -0.17
COL18A1-205ENST00000423214 TMEM123Q8N131 208 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 LSMEM1Q8N8F7 131 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 ADPRHL1Q8NDY3 354 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 IL17RDQ8NFM7 739 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 MAGEB18Q96M61 343 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 EPYCQ99645 322 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 ASPNQ9BXN1 380 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 NOX3Q9HBY0 568 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 SLAMF8Q9P0V8 285 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 KLHL14Q9P2G3 628 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 SLC13A4Q9UKG4 626 aa13.98□□□□□ -0.17
COL18A1-205ENST00000423214 ZNF503-AS2A6NEH8 195 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 ARAFP10398 606 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 CD79AP11912 226 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 PPIBP23284 216 aaKnown RBP13.97□□□□□ -0.17
COL18A1-205ENST00000423214 GIFP27352 417 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 HTR2AP28223 471 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 SRSF2Q01130 221 aaKnown RBP13.97□□□□□ -0.17
COL18A1-205ENST00000423214 GSG1Q2KHT4 349 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 REEP3Q6NUK4 255 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 ULK3Q6PHR2 472 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 DHRS4L2Q6PKH6 230 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 BLOC1S3Q6QNY0 202 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 NET1Q7Z628 596 aaPredicted RBP13.97□□□□□ -0.17
COL18A1-205ENST00000423214 SNX32Q86XE0 403 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 CDK20Q8IZL9 346 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 ZNF837Q96EG3 531 aaPredicted RBP13.97□□□□□ -0.17
COL18A1-205ENST00000423214 SLC47A1Q96FL8 570 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 SNX18Q96RF0 628 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 TPK1Q9H3S4 243 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 CMAHPQ9Y471 501 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 CORINQ9Y5Q5 1042 aa13.97□□□□□ -0.17
COL18A1-205ENST00000423214 IGKV1D-42A0A075B6H8 117 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 IFNGR1P15260 489 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 HOXB9P17482 250 aaPredicted RBP13.96□□□□□ -0.17
COL18A1-205ENST00000423214 MRPL19P49406 292 aaKnown RBP13.96□□□□□ -0.17
COL18A1-205ENST00000423214 CDK6Q00534 326 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 AGKQ53H12 422 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 PAGE3Q5JUK9 113 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 LIPNQ5VXI9 398 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 FAM91A1Q658Y4 838 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 ZNF813Q6ZN06 617 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 RANBP3LQ86VV4 465 aaPredicted RBP13.96□□□□□ -0.17
COL18A1-205ENST00000423214 ZCCHC24Q8N2G6 241 aaKnown RBP13.96□□□□□ -0.17
COL18A1-205ENST00000423214 C10orf53Q8N6V4 93 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 UBASH3BQ8TF42 649 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 SPDL1Q96EA4 605 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 ZNF607Q96SK3 696 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 DOK1Q99704 481 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 SOX7Q9BT81 388 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 ULBP2Q9BZM5 246 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 TMEM27Q9HBJ8 222 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 SLC25A37Q9NYZ2 338 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 CORO2BQ9UQ03 480 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 POFUT2Q9Y2G5 429 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 SPEF1Q9Y4P9 236 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 NOX1Q9Y5S8 564 aa13.96□□□□□ -0.17
COL18A1-205ENST00000423214 A0A087WUJ7 227 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 LOC102725191A0A1B0GVB3 256 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 PRORSD1PA6NEY8 169 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 M0R233 179 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 RAB36O95755 333 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 HLA-HP01893 362 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 ADRA2AP08913 450 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 TACSTD2P09758 323 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 SRP14P37108 136 aaKnown RBP13.95□□□□□ -0.18
COL18A1-205ENST00000423214 PUDPQ08623 228 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 TRMT5Q32P41 509 aaKnown RBP13.95□□□□□ -0.18
COL18A1-205ENST00000423214 LRIF1Q5T3J3 769 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 UGT2A3Q6UWM9 527 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 ZNF786Q8N393 782 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 SCAIQ8N9R8 606 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 LINC01356Q8N9X3 169 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 BHLHE22Q8NFJ8 381 aaPredicted RBP13.95□□□□□ -0.18
COL18A1-205ENST00000423214 OR6N1Q8NGY5 312 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 HPS1Q92902 700 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 EMC6Q9BV81 110 aa13.95□□□□□ -0.18
COL18A1-205ENST00000423214 SLC52A3Q9NQ40 469 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms