RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 UEVLDQ8IX04 471 aa15.05■□□□□ -0
MSH6-203ENST00000420813 ANKS4BQ8N8V4 417 aa15.05■□□□□ -0
MSH6-203ENST00000420813 ZNF837Q96EG3 531 aaPredicted RBP15.05■□□□□ -0
MSH6-203ENST00000420813 LRR1Q96L50 414 aa15.05■□□□□ -0
MSH6-203ENST00000420813 ANKRD27Q96NW4 1050 aa15.05■□□□□ -0
MSH6-203ENST00000420813 FOXN4Q96NZ1 517 aa15.05■□□□□ -0
MSH6-203ENST00000420813 EBF4Q9BQW3 602 aa15.05■□□□□ -0
MSH6-203ENST00000420813 PRR14Q9BWN1 585 aa15.05■□□□□ -0
MSH6-203ENST00000420813 TMEM27Q9HBJ8 222 aa15.05■□□□□ -0
MSH6-203ENST00000420813 SLCO1B3Q9NPD5 702 aa15.05■□□□□ -0
MSH6-203ENST00000420813 KCNS2Q9ULS6 477 aa15.05■□□□□ -0
MSH6-203ENST00000420813 USP22Q9UPT9 525 aa15.05■□□□□ -0
MSH6-203ENST00000420813 IGHV2OR16-5A0A0B4J2B6 119 aa15.04■□□□□ -0
MSH6-203ENST00000420813 ZNF503-AS2A6NEH8 195 aa15.04■□□□□ -0
MSH6-203ENST00000420813 EVPLLA8MZ36 301 aa15.04■□□□□ -0
MSH6-203ENST00000420813 MS4A18H0YCH9 400 aa15.04■□□□□ -0
MSH6-203ENST00000420813 PHF1O43189 567 aaPredicted RBP15.04■□□□□ -0
MSH6-203ENST00000420813 ERCC1P07992 297 aaPredicted RBP15.04■□□□□ -0
MSH6-203ENST00000420813 APEHP13798 732 aaKnown RBP15.04■□□□□ -0
MSH6-203ENST00000420813 NQO1P15559 274 aaKnown RBP15.04■□□□□ -0
MSH6-203ENST00000420813 NPR2P20594 1047 aa15.04■□□□□ -0
MSH6-203ENST00000420813 THBS4P35443 961 aa15.04■□□□□ -0
MSH6-203ENST00000420813 IL1RL1Q01638 556 aa15.04■□□□□ -0
MSH6-203ENST00000420813 OR1Q1Q15612 314 aa15.04■□□□□ -0
MSH6-203ENST00000420813 MS4A18Q3C1V0 323 aa15.04■□□□□ -0
MSH6-203ENST00000420813 C20orf196Q8IYI0 205 aa15.04■□□□□ -0
MSH6-203ENST00000420813 HIPK4Q8NE63 616 aa15.04■□□□□ -0
MSH6-203ENST00000420813 NEU4Q8WWR8 484 aaPredicted RBP15.04■□□□□ -0
MSH6-203ENST00000420813 TMEM43Q9BTV4 400 aa15.04■□□□□ -0
MSH6-203ENST00000420813 ASPNQ9BXN1 380 aa15.04■□□□□ -0
MSH6-203ENST00000420813 IKZF5Q9H5V7 419 aa15.04■□□□□ -0
MSH6-203ENST00000420813 SLC13A4Q9UKG4 626 aa15.04■□□□□ -0
MSH6-203ENST00000420813 NOX1Q9Y5S8 564 aa15.04■□□□□ -0
MSH6-203ENST00000420813 IGHV4-61A0A0C4DH41 118 aa15.03■□□□□ -0
MSH6-203ENST00000420813 hCG_2039718K7EN88 272 aa15.03■□□□□ -0
MSH6-203ENST00000420813 HPRP00739 348 aa15.03■□□□□ -0
MSH6-203ENST00000420813 BGLAPP02818 100 aa15.03■□□□□ -0
MSH6-203ENST00000420813 ZNF23P17027 643 aa15.03■□□□□ -0
MSH6-203ENST00000420813 CBLP22681 906 aa15.03■□□□□ -0
MSH6-203ENST00000420813 IGFBP5P24593 272 aa15.03■□□□□ -0
MSH6-203ENST00000420813 NPRL3Q12980 569 aa15.03■□□□□ -0
MSH6-203ENST00000420813 ADRM1Q16186 407 aa15.03■□□□□ -0
MSH6-203ENST00000420813 CARTPTQ16568 116 aa15.03■□□□□ -0
MSH6-203ENST00000420813 PHYHD1Q5SRE7 291 aa15.03■□□□□ -0
MSH6-203ENST00000420813 ZNF627Q7L945 461 aa15.03■□□□□ -0
MSH6-203ENST00000420813 MDP1Q86V88 176 aa15.03■□□□□ -0
MSH6-203ENST00000420813 RANBP3LQ86VV4 465 aaPredicted RBP15.03■□□□□ -0
MSH6-203ENST00000420813 RNF217Q8TC41 542 aa15.03■□□□□ -0
MSH6-203ENST00000420813 MSI2Q96DH6 328 aaKnown RBP15.03■□□□□ -0
MSH6-203ENST00000420813 DOK1Q99704 481 aa15.03■□□□□ -0
MSH6-203ENST00000420813 B3GAT2Q9NPZ5 323 aa15.03■□□□□ -0
MSH6-203ENST00000420813 MRPL39Q9NYK5 338 aaKnown RBP15.03■□□□□ -0
MSH6-203ENST00000420813 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.03■□□□□ -0
MSH6-203ENST00000420813 ANGPT4Q9Y264 503 aa15.03■□□□□ -0
MSH6-203ENST00000420813 LOC100289279A0A1B0GTE1 492 aa15.02■□□□□ -0
MSH6-203ENST00000420813 M0R3G1 203 aa15.02■□□□□ -0
MSH6-203ENST00000420813 TPST2O60704 377 aa15.02■□□□□ -0
MSH6-203ENST00000420813 FMO6PO60774 539 aa15.02■□□□□ -0
MSH6-203ENST00000420813 HLA-DOBP13765 273 aa15.02■□□□□ -0
MSH6-203ENST00000420813 GIFP27352 417 aa15.02■□□□□ -0
MSH6-203ENST00000420813 AQP5P55064 265 aa15.02■□□□□ -0
MSH6-203ENST00000420813 POU3F1Q03052 451 aaPredicted RBP15.02■□□□□ -0
MSH6-203ENST00000420813 PUDPQ08623 228 aa15.02■□□□□ -0
MSH6-203ENST00000420813 SQLEQ14534 574 aa15.02■□□□□ -0
MSH6-203ENST00000420813 AGKQ53H12 422 aa15.02■□□□□ -0
MSH6-203ENST00000420813 NHLRC1Q6VVB1 395 aa15.02■□□□□ -0
MSH6-203ENST00000420813 SPATA21Q7Z572 469 aa15.02■□□□□ -0
MSH6-203ENST00000420813 PXKQ7Z7A4 578 aa15.02■□□□□ -0
MSH6-203ENST00000420813 SNX32Q86XE0 403 aa15.02■□□□□ -0
MSH6-203ENST00000420813 ARMC8Q8IUR7 673 aa15.02■□□□□ -0
MSH6-203ENST00000420813 STON2Q8WXE9 905 aa15.02■□□□□ -0
MSH6-203ENST00000420813 CPPED1Q9BRF8 314 aaPredicted RBP15.02■□□□□ -0
MSH6-203ENST00000420813 BPESC1Q9GZL8 116 aa15.02■□□□□ -0
MSH6-203ENST00000420813 RABEP2Q9H5N1 569 aa15.02■□□□□ -0
MSH6-203ENST00000420813 NOX3Q9HBY0 568 aa15.02■□□□□ -0
MSH6-203ENST00000420813 B3GNT2Q9NY97 397 aa15.02■□□□□ -0
MSH6-203ENST00000420813 TMEM129A0AVI4 362 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 SLC35F4A4IF30 521 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 SEC14L2O76054 403 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 MFN2O95140 757 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 STAMBPO95630 424 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 MT-ATP6P00846 226 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 SRD5A1P18405 259 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 AQP1P29972 269 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 CAPZA2P47755 286 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 CDH12P55289 794 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 PCBP3P57721 371 aaKnown RBP15.01□□□□□ -0.01
MSH6-203ENST00000420813 PMS2P3Q13401 168 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 SNTB2Q13425 540 aaKnown RBP15.01□□□□□ -0.01
MSH6-203ENST00000420813 DAG1Q14118 895 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 GSG1Q2KHT4 349 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 IQCCQ4KMZ1 466 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 RUNDC3AQ59EK9 446 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 ZNF613Q6PF04 617 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 DLEU7Q6UYE1 221 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 SVOPLQ8N434 492 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 ARIH2OSQ8N7S6 290 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 C11orf65Q8NCR3 313 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 MOGAT1Q96PD6 335 aa15.01□□□□□ -0.01
MSH6-203ENST00000420813 EMC6Q9BV81 110 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms