RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 RPS6KA3P51812 740 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 SMSP52788 366 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 RPL27P61353 136 aaKnown RBP11.11□□□□□ -0.63
TMEM53-206ENST00000420706 MYBPC1Q00872 1141 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 POU3F1Q03052 451 aaPredicted RBP11.11□□□□□ -0.63
TMEM53-206ENST00000420706 C1DQ13901 141 aaKnown RBP11.11□□□□□ -0.63
TMEM53-206ENST00000420706 RNPS1Q15287 305 aaKnown RBP11.11□□□□□ -0.63
TMEM53-206ENST00000420706 ACKR1Q16570 336 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 PGGHGQ32M88 737 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 TTC23Q5W5X9 447 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 C12orf73Q69YU5 71 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 MCEMP1Q8IX19 187 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 TUSC5Q8IXB3 177 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 C9orf106Q8NAJ2 232 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 MBD3L2Q8NHZ7 208 aaPredicted RBP11.11□□□□□ -0.63
TMEM53-206ENST00000420706 CYGBQ8WWM9 190 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 TFAP2CQ92754 450 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 ZNF775Q96BV0 537 aaPredicted RBP11.11□□□□□ -0.63
TMEM53-206ENST00000420706 Q96M85 177 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 ZNF385AQ96PM9 386 aaKnown RBP11.11□□□□□ -0.63
TMEM53-206ENST00000420706 TSPAN32Q96QS1 320 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 PITX2Q99697 317 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 POLDIP3Q9BY77 421 aaKnown RBP11.11□□□□□ -0.63
TMEM53-206ENST00000420706 BCO1Q9HAY6 547 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 MED29Q9NX70 200 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 KLHL9Q9P2J3 617 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 GRHPRQ9UBQ7 328 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 NDRG4Q9ULP0 352 aaKnown RBP11.11□□□□□ -0.63
TMEM53-206ENST00000420706 ADAM18Q9Y3Q7 739 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 FLVCR1Q9Y5Y0 555 aa11.11□□□□□ -0.63
TMEM53-206ENST00000420706 SLC35F4A4IF30 521 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 ZNF724A8MTY0 619 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 GPR171O14626 319 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 TOXO94900 526 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 HMGN1P05114 100 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 YES1P07947 543 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 NTF4P34130 210 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 TIMP3P35625 211 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 GGT2P36268 569 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 ACVR1BP36896 505 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 CAPGP40121 348 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 BIDP55957 195 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 CLDN17P56750 224 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 TOP3AQ13472 1001 aaPredicted RBP11.1□□□□□ -0.63
TMEM53-206ENST00000420706 KEAP1Q14145 624 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 MELKQ14680 651 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 ZNF362Q5T0B9 420 aaPredicted RBP11.1□□□□□ -0.63
TMEM53-206ENST00000420706 SLC35F1Q5T1Q4 408 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 ARMC4Q5T2S8 1044 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 EEF1A1P5Q5VTE0 462 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 GPR139Q6DWJ6 353 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 B3GNT6Q6ZMB0 384 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 C3P1Q6ZMU1 363 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 WDFY1Q8IWB7 410 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 ZNF843Q8N446 348 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 RPRMLQ8N4K4 120 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 ARIH2OSQ8N7S6 290 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 ASB10Q8WXI3 467 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 ZNF184Q99676 751 aaPredicted RBP11.1□□□□□ -0.63
TMEM53-206ENST00000420706 TM9SF2Q99805 663 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 EMC6Q9BV81 110 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 GP6Q9HCN6 339 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 GLRX2Q9NS18 164 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 TVP23BQ9NYZ1 205 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 TINAGQ9UJW2 476 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 CLEC4AQ9UMR7 237 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 GMPPBQ9Y5P6 360 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 ARHGAP21Q5T5U3 1957 aa11.1□□□□□ -0.63
TMEM53-206ENST00000420706 TLN1Q9Y490 2541 aaKnown RBP11.09□□□□□ -0.63
TMEM53-206ENST00000420706 ATRXP46100 2492 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 TEX13CA0A0J9YWL9 993 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 ZNF726A6NNF4 738 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 SURF4O15260 269 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 TRMUO75648 421 aaKnown RBP11.09□□□□□ -0.63
TMEM53-206ENST00000420706 C1QL1O75973 258 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 ZNF432O94892 652 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 SLC2A10O95528 541 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 GLI4P10075 376 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 HIST1H1CP16403 213 aaKnown RBP11.09□□□□□ -0.63
TMEM53-206ENST00000420706 NOS3P29474 1203 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 SDHAP31040 664 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 CEACAM8P31997 349 aaPredicted RBP11.09□□□□□ -0.63
TMEM53-206ENST00000420706 CDKN2AP42771 156 aaKnown RBP11.09□□□□□ -0.63
TMEM53-206ENST00000420706 HSPA13P48723 471 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 DAP3P51398 398 aaKnown RBP11.09□□□□□ -0.63
TMEM53-206ENST00000420706 EFNB1P98172 346 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 TLE1Q04724 770 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 MRPL49Q13405 166 aaKnown RBP11.09□□□□□ -0.63
TMEM53-206ENST00000420706 SNAPC1Q16533 368 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 C6orf52Q5T4I8 152 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 OR2A2Q6IF42 318 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 CASP12Q6UXS9 341 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 USP51Q70EK9 711 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 CCDC71Q8IV32 467 aaPredicted RBP11.09□□□□□ -0.63
TMEM53-206ENST00000420706 OR4K13Q8NH42 304 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 OR6X1Q8NH79 312 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 ZNF519Q8TB69 540 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 TMEM45BQ96B21 275 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 RASD2Q96D21 266 aa11.09□□□□□ -0.63
TMEM53-206ENST00000420706 GMPPAQ96IJ6 420 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms