RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 ANXA11P50995 505 aaKnown RBP8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 COPZ1P61923 177 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 RPS23P62266 143 aaKnown RBP8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 TRMT5Q32P41 509 aaKnown RBP8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 LIN52Q52LA3 116 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 ZNF311Q5JNZ3 666 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 COX20Q5RI15 118 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 PHYHD1Q5SRE7 291 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 ZNF836Q6ZNA1 936 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 ZNF627Q7L945 461 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 VRK2Q86Y07 508 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 BPIFB2Q8N4F0 458 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 LRRC17Q8N6Y2 441 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 PIK3C3Q8NEB9 887 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 KIF18AQ8NI77 898 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 OXGR1Q96P68 337 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 AKTIPQ9H8T0 292 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 ZNF224Q9NZL3 707 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 OPN4Q9UHM6 478 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 BTNL2Q9UIR0 455 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 CHST2Q9Y4C5 530 aa8.72□□□□□ -1.01
TNFAIP3-202ENST00000420009 CCDC154A6NI56 674 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 M0R082 166 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 AKAP8O43823 692 aaKnown RBP8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 PRSS23O95084 383 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 NUDT17P0C025 328 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 NR2F1P10589 423 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 NAT2P11245 290 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 CDKN2CP42773 168 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 MAGEB1P43366 347 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 RPS5P46782 204 aaKnown RBP8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 GSK3AP49840 483 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 CLNS1AP54105 237 aaKnown RBP8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 CHI3L2Q15782 390 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 PDCD2Q16342 344 aaPredicted RBP8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 MMEL1Q495T6 779 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 ATG16L1Q676U5 607 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 C6orf89Q6UWU4 347 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 C20orf196Q8IYI0 205 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 CLIP4Q8N3C7 705 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 OR52P1PQ8NH57 321 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 ZNF417Q8TAU3 575 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 NANPQ8TBE9 248 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 RNF217Q8TC41 542 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 ANP32BQ92688 251 aaKnown RBP8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 DVL3Q92997 716 aaPredicted RBP8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 SLC25A36Q96CQ1 311 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 RAB39BQ96DA2 213 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 KTI12Q96EK9 354 aaPredicted RBP8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 ZNF587Q96SQ5 575 aaPredicted RBP8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 NTN4Q9HB63 628 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 DDX28Q9NUL7 540 aaKnown RBP8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 ZNF346Q9UL40 294 aaKnown RBP8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 FZR1Q9UM11 496 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 ZNF443Q9Y2A4 671 aaPredicted RBP8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 CORINQ9Y5Q5 1042 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 NOX1Q9Y5S8 564 aa8.71□□□□□ -1.02
TNFAIP3-202ENST00000420009 A0A1W2PPW3 197 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 C17orf100A8MU93 164 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 M0R3G1 203 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 AIM2O14862 343 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 IGHV2-5P01817 119 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 VSIG8P0DPA2 414 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 CD79AP11912 226 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 B4GALT1P15291 398 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 NCF2P19878 526 aaPredicted RBP8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 GATA3P23771 443 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 GTF2E2P29084 291 aaKnown RBP8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 S100A3P33764 101 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 MVDP53602 400 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 GALK2Q01415 458 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 PIGFQ07326 219 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 ZP4Q12836 540 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 C1DQ13901 141 aaKnown RBP8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 MIDNQ504T8 468 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 AVPI1Q5T686 147 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 GKAP1Q5VSY0 366 aaPredicted RBP8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 DCAF12L2Q5VW00 463 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 ZNF813Q6ZN06 617 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 SERPINA11Q86U17 422 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 ZNF584Q8IVC4 421 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 LRRC34Q8IZ02 419 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 TRIML2Q8N7C3 387 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 ADPRHL1Q8NDY3 354 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 PNPT1Q8TCS8 783 aaKnown RBP8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 TCP10LQ8TDR4 215 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 C22orf15Q8WYQ4 148 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 LRRC58Q96CX6 371 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 PPP1R36Q96LQ0 422 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 PANX1Q96RD7 426 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 DENND2DQ9H6A0 471 aaPredicted RBP8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 NKIRAS2Q9NYR9 191 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 P2RX2Q9UBL9 471 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 SLC7A8Q9UHI5 535 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 DUSP13Q9UII6 198 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 PPIAL4AQ9Y536 164 aa8.7□□□□□ -1.02
TNFAIP3-202ENST00000420009 IGKV1D-42A0A075B6H8 117 aa8.69□□□□□ -1.02
TNFAIP3-202ENST00000420009 IGLV3-9A0A075B6K5 115 aa8.69□□□□□ -1.02
TNFAIP3-202ENST00000420009 OR2T1O43869 369 aa8.69□□□□□ -1.02
TNFAIP3-202ENST00000420009 CDC14BO60729 498 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms