RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 GZMMP51124 257 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ZNF140P52738 457 aaPredicted RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 CAPZA1P52907 286 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 NKX2-5P52952 324 aaPredicted RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 LBX1P52954 281 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 MTCP1P56278 107 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 CLDN8P56748 225 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ERVPABLB-1P60509 514 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 SRP54P61011 504 aaKnown RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 ERVK11-1P61568 191 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 RPS14P62263 151 aaKnown RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 RPL38P63173 70 aaKnown RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 PSPHP78330 225 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 GALK2Q01415 458 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 IL1RL1Q01638 556 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ARHGAP1Q07960 439 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 RBBP4Q09028 425 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 RASGEF1BQ0VAM2 473 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 MRPL28Q13084 256 aaKnown RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 MAB21L1Q13394 359 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 C1DQ13901 141 aaKnown RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 QPRTQ15274 297 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 HKDC1Q2TB90 917 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 FAM174BQ3ZCQ3 159 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 BCL7AQ4VC05 210 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 CCDC58Q4VC31 144 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 SMUG1Q53HV7 270 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 LRRC73Q5JTD7 316 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 SPANXN4Q5MJ08 99 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 FAM182AQ5T1J6 154 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 PDZK1Q5T2W1 519 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 DDI2Q5TDH0 399 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ANXA8L1Q5VT79 327 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 HACD4Q5VWC8 232 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 WSCD1Q658N2 575 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 SLC25A47Q6Q0C1 308 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 PLET1Q6UQ28 207 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 SUSD1Q6UWL2 747 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 GCNT7Q6ZNI0 430 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 IL17RELQ6ZVW7 336 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 GLT6D1Q7Z4J2 308 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 GOLGA7Q7Z5G4 137 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ABI3BPQ7Z7G0 1075 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 TMEM179BQ7Z7N9 219 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 CYP4Z1Q86W10 505 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 AMIGO1Q86WK6 493 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 HOGA1Q86XE5 327 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 SNX29P2Q8IUI4 249 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 FAM219AQ8IW50 185 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 FBXO16Q8IX29 292 aaPredicted RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 MSRB3Q8IXL7 192 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ENTHD1Q8IYW4 607 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ELMOD2Q8IZ81 293 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 RDH10Q8IZV5 341 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 THEM5Q8N1Q8 247 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 LIX1Q8N485 282 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 KLHDC1Q8N7A1 406 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 FAM86B1Q8N7N1 296 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 NKAIN3Q8N8D7 197 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 FAM83FQ8NEG4 500 aaPredicted RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 DUSP18Q8NEJ0 188 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 LPCAT1Q8NF37 534 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 OR4F6Q8NGB9 312 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 OR10G8Q8NGN5 311 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 OR1L3Q8NH93 324 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 OR2T6Q8NHC8 308 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ENKURQ8TC29 256 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 DNAJA4Q8WW22 397 aaPredicted RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 APH1BQ8WW43 257 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 NSMAFQ92636 917 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 GGHQ92820 318 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 DNASE1L2Q92874 299 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 WBP2Q969T9 261 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ULK4Q96C45 1275 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 CXorf40BQ96DE9 158 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 CMTM7Q96FZ5 175 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 PCED1BQ96HM7 432 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 CDKN2AIPNLQ96HQ2 116 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 RNF170Q96K19 258 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 C10orf90Q96M02 699 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 HYLS1Q96M11 299 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 OR52E6Q96RD3 313 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 GPR21Q99679 349 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 COQ7Q99807 217 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 MED18Q9BUE0 208 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 MND1Q9BWT6 205 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 CLEC7AQ9BXN2 247 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 SRRQ9GZT4 340 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 FBXO44Q9H4M3 255 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ACTL8Q9H568 366 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 NT5DC2Q9H857 520 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 LRTM1Q9HBL6 345 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 ISYNA1Q9NPH2 558 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 MAN2C1Q9NTJ4 1040 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 CLN6Q9NWW5 311 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 FAM120CQ9NX05 1096 aaKnown RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 IMPAD1Q9NX62 359 aa2.3□□□□□ -2.04
VPS41-206ENST00000418457 THUMPD1Q9NXG2 353 aaKnown RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 PAQR5Q9NXK6 330 aaPredicted RBP2.3□□□□□ -2.04
VPS41-206ENST00000418457 FBXL12Q9NXK8 326 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms