RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 C11orf98E9PRG8 122 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 LYNX1G3V0Z9 82 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 AIM2O14862 343 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 AKAP8O43823 692 aaKnown RBP6.05□□□□□ -1.44
COPS3-202ENST00000417352 OR2T1O43869 369 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 RGS9O75916 674 aaPredicted RBP6.05□□□□□ -1.44
COPS3-202ENST00000417352 HLA-HP01893 362 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 LYNX1P0DP58 116 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 RPS4Y1P22090 263 aaKnown RBP6.05□□□□□ -1.44
COPS3-202ENST00000417352 SLC6A2P23975 617 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 IGFBP5P24593 272 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 APEX1P27695 318 aaKnown RBP6.05□□□□□ -1.44
COPS3-202ENST00000417352 GRPRP30550 384 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 CALCRP30988 508 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 ARR3P36575 388 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 PTDSS1P48651 473 aaKnown RBP6.05□□□□□ -1.44
COPS3-202ENST00000417352 CHN2P52757 468 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 SH3BGRP55822 239 aaPredicted RBP6.05□□□□□ -1.44
COPS3-202ENST00000417352 POU3F1Q03052 451 aaPredicted RBP6.05□□□□□ -1.44
COPS3-202ENST00000417352 SNTB2Q13425 540 aaKnown RBP6.05□□□□□ -1.44
COPS3-202ENST00000417352 CAMK2DQ13557 499 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 SQLEQ14534 574 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 RGNQ15493 299 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 MAPK11Q15759 364 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 ZSWIM7Q19AV6 140 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 SWI5Q1ZZU3 235 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 CR1LQ2VPA4 569 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 TRMT5Q32P41 509 aaKnown RBP6.05□□□□□ -1.44
COPS3-202ENST00000417352 ALKBH6Q3KRA9 238 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 GLIPR1L2Q4G1C9 344 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 PDCD4Q53EL6 469 aaKnown RBP6.05□□□□□ -1.44
COPS3-202ENST00000417352 ALG10BQ5I7T1 473 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 GCNT6Q5T4J0 391 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 RNF220Q5VTB9 566 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 ZNF813Q6ZN06 617 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 RINLQ6ZS11 566 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 H1FNTQ75WM6 255 aaPredicted RBP6.05□□□□□ -1.44
COPS3-202ENST00000417352 LINGO2Q7L985 606 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 MDP1Q86V88 176 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 MREGQ8N565 214 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 ICA1LQ8NDH6 482 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 PIK3C3Q8NEB9 887 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 BBS10Q8TAM1 723 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 STK35Q8TDR2 534 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 CKAP2Q8WWK9 683 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 SLC38A4Q969I6 547 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 SPATA5L1Q9BVQ7 753 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 C19orf24Q9BVV8 132 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 SSBP4Q9BWG4 385 aaPredicted RBP6.05□□□□□ -1.44
COPS3-202ENST00000417352 ASPNQ9BXN1 380 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 OR51B6Q9H340 312 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 TMEM27Q9HBJ8 222 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 LPAR2Q9HBW0 351 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 MYOZ1Q9NP98 299 aaPredicted RBP6.05□□□□□ -1.44
COPS3-202ENST00000417352 CCDC167Q9P0B6 97 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 DUSP13Q9UII6 198 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 TMEFF2Q9UIK5 374 aaPredicted RBP6.05□□□□□ -1.44
COPS3-202ENST00000417352 FZR1Q9UM11 496 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 CMAHPQ9Y471 501 aa6.05□□□□□ -1.44
COPS3-202ENST00000417352 ARFGEF3Q5TH69 2177 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 MALRD1Q5VYJ5 2156 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 TRAV36DV7A0A075B6V5 113 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 A0A096LNT2 108 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 ARPC4-TTLL3A0A0A6YYG9 625 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 A0A1B0GWA3 101 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 A0A1W2PPW3 197 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 ZNF99A8MXY4 864 aaPredicted RBP6.04□□□□□ -1.44
COPS3-202ENST00000417352 EVPLLA8MZ36 301 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 POLR3GO15318 223 aaPredicted RBP6.04□□□□□ -1.44
COPS3-202ENST00000417352 TPD52L2O43399 206 aaKnown RBP6.04□□□□□ -1.44
COPS3-202ENST00000417352 SERPINB7O75635 380 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 STAMBPO95630 424 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 RAB36O95755 333 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 HIST1H2ABP04908 130 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 B4GALT1P15291 398 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 CBR1P16152 277 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 ZNF23P17027 643 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 PAX7P23759 505 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 LSP1P33241 339 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 RGS8P57771 180 aaPredicted RBP6.04□□□□□ -1.44
COPS3-202ENST00000417352 CDK6Q00534 326 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 GSG1Q2KHT4 349 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 KRTAP24-1Q3LI83 254 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 FAM69AQ5T7M9 428 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 AP1ARQ63HQ0 302 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 REEP3Q6NUK4 255 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 ULK3Q6PHR2 472 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 ZNF771Q7L3S4 317 aaPredicted RBP6.04□□□□□ -1.44
COPS3-202ENST00000417352 HIST3H2AQ7L7L0 130 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 MYPOPQ86VE0 399 aaPredicted RBP6.04□□□□□ -1.44
COPS3-202ENST00000417352 RANBP3LQ86VV4 465 aaPredicted RBP6.04□□□□□ -1.44
COPS3-202ENST00000417352 SNX32Q86XE0 403 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 CDK20Q8IZL9 346 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 SLC26A7Q8TE54 656 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 UBASH3BQ8TF42 649 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 DNAJA4Q8WW22 397 aaPredicted RBP6.04□□□□□ -1.44
COPS3-202ENST00000417352 DYDC1Q8WWB3 177 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 HIST1H2ACQ93077 130 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 SLC47A1Q96FL8 570 aa6.04□□□□□ -1.44
COPS3-202ENST00000417352 TXNDC15Q96J42 360 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms