RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 ZNF525Q8N782 197 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 SLC26A7Q8TE54 656 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 C10orf105Q8TEF2 133 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 HTRA1Q92743 480 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 LRR1Q96L50 414 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 OR2M2Q96R28 347 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 TMEM43Q9BTV4 400 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 CRLF2Q9HC73 371 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 FGFR1OP2Q9NVK5 253 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 FBN1P35555 2871 aaKnown RBP22.04■■□□□ 1.12
VEGFA-208ENST00000417285 A0A096LNT2 108 aa22.03■■□□□ 1.12
VEGFA-208ENST00000417285 A8MV72 311 aaPredicted RBP22.03■■□□□ 1.12
VEGFA-208ENST00000417285 B9A039 149 aa22.03■■□□□ 1.12
VEGFA-208ENST00000417285 FBP2O00757 339 aa22.03■■□□□ 1.12
VEGFA-208ENST00000417285 IGKV3-15P01624 115 aa22.03■■□□□ 1.12
VEGFA-208ENST00000417285 BGLAPP02818 100 aa22.03■■□□□ 1.12
VEGFA-208ENST00000417285 MMEL1Q495T6 779 aa22.03■■□□□ 1.12
VEGFA-208ENST00000417285 IL17RDQ8NFM7 739 aa22.03■■□□□ 1.12
VEGFA-208ENST00000417285 GPR32P1Q8NGA4 272 aa22.03■■□□□ 1.12
VEGFA-208ENST00000417285 RASSF5Q8WWW0 418 aa22.03■■□□□ 1.12
VEGFA-208ENST00000417285 NELFAQ9H3P2 528 aa22.03■■□□□ 1.12
VEGFA-208ENST00000417285 NOX1Q9Y5S8 564 aa22.03■■□□□ 1.12
VEGFA-208ENST00000417285 FKBP7Q9Y680 259 aa22.03■■□□□ 1.12
VEGFA-208ENST00000417285 TRAF3IP2O43734 574 aaPredicted RBP22.02■■□□□ 1.12
VEGFA-208ENST00000417285 CHP2O43745 196 aa22.02■■□□□ 1.12
VEGFA-208ENST00000417285 GPRIN2O60269 458 aa22.02■■□□□ 1.12
VEGFA-208ENST00000417285 VIMP08670 466 aaKnown RBP22.02■■□□□ 1.12
VEGFA-208ENST00000417285 CECR9P0C854 216 aa22.02■■□□□ 1.12
VEGFA-208ENST00000417285 ARR3P36575 388 aa22.02■■□□□ 1.12
VEGFA-208ENST00000417285 PMS2P3Q13401 168 aa22.02■■□□□ 1.12
VEGFA-208ENST00000417285 MAPRE2Q15555 327 aa22.02■■□□□ 1.12
VEGFA-208ENST00000417285 VMACQ2NL98 169 aa22.02■■□□□ 1.12
VEGFA-208ENST00000417285 CEACAM16Q2WEN9 425 aa22.02■■□□□ 1.12
VEGFA-208ENST00000417285 TMEM249Q2WGJ8 235 aa22.02■■□□□ 1.12
VEGFA-208ENST00000417285 COQ5Q5HYK3 327 aa22.02■■□□□ 1.12
VEGFA-208ENST00000417285 NANOGP8Q6NSW7 305 aa22.02■■□□□ 1.12
VEGFA-208ENST00000417285 TMEM123Q8N131 208 aa22.02■■□□□ 1.12
VEGFA-208ENST00000417285 C10orf53Q8N6V4 93 aa22.02■■□□□ 1.12
VEGFA-208ENST00000417285 OR6T1Q8NGN1 323 aa22.02■■□□□ 1.12
VEGFA-208ENST00000417285 NANOGQ9H9S0 305 aa22.02■■□□□ 1.12
VEGFA-208ENST00000417285 MRPL39Q9NYK5 338 aaKnown RBP22.02■■□□□ 1.12
VEGFA-208ENST00000417285 BBIP1A8MTZ0 92 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 ZNF99A8MXY4 864 aaPredicted RBP22.01■■□□□ 1.11
VEGFA-208ENST00000417285 MT-ATP6P00846 226 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 NPPAP01160 153 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 TUBA1BP68363 451 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 TUBA4AP68366 448 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 VLDLRP98155 873 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 KLF10Q13118 480 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 ENTPD8Q5MY95 495 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 TUBA1AQ71U36 451 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 SNX32Q86XE0 403 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 C20orf196Q8IYI0 205 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 NUP37Q8NFH4 326 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 OR8J3Q8NGG0 315 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 LRRC58Q96CX6 371 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 MDFIQ99750 246 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 ECSITQ9BQ95 431 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 B3GAT2Q9NPZ5 323 aa22.01■■□□□ 1.11
VEGFA-208ENST00000417285 CPSF4LA6NMK7 179 aaKnown RBP22■■□□□ 1.11
VEGFA-208ENST00000417285 NDUFS8O00217 210 aa22■■□□□ 1.11
VEGFA-208ENST00000417285 IFNA2P01563 188 aa22■■□□□ 1.11
VEGFA-208ENST00000417285 OR4A8P0C604 315 aa22■■□□□ 1.11
VEGFA-208ENST00000417285 CD247P20963 164 aa22■■□□□ 1.11
VEGFA-208ENST00000417285 USF1P22415 310 aaPredicted RBP22■■□□□ 1.11
VEGFA-208ENST00000417285 GZMMP51124 257 aa22■■□□□ 1.11
VEGFA-208ENST00000417285 PUDPQ08623 228 aa22■■□□□ 1.11
VEGFA-208ENST00000417285 EFNB3Q15768 340 aa22■■□□□ 1.11
VEGFA-208ENST00000417285 NPTX1Q15818 432 aa22■■□□□ 1.11
VEGFA-208ENST00000417285 LINC00114Q6XXX2 140 aa22■■□□□ 1.11
VEGFA-208ENST00000417285 PXKQ7Z7A4 578 aa22■■□□□ 1.11
VEGFA-208ENST00000417285 VANGL1Q8TAA9 524 aaPredicted RBP22■■□□□ 1.11
VEGFA-208ENST00000417285 NANOS1Q8WY41 292 aaKnown RBP22■■□□□ 1.11
VEGFA-208ENST00000417285 TAMM41Q96BW9 452 aa22■■□□□ 1.11
VEGFA-208ENST00000417285 MOGAT1Q96PD6 335 aa22■■□□□ 1.11
VEGFA-208ENST00000417285 MYOZ1Q9NP98 299 aaPredicted RBP22■■□□□ 1.11
VEGFA-208ENST00000417285 USP22Q9UPT9 525 aa22■■□□□ 1.11
VEGFA-208ENST00000417285 CR1P17927 2039 aa22■■□□□ 1.11
VEGFA-208ENST00000417285 ZNF726A6NNF4 738 aa21.99■■□□□ 1.11
VEGFA-208ENST00000417285 M0R3G1 203 aa21.99■■□□□ 1.11
VEGFA-208ENST00000417285 MRASO14807 208 aa21.99■■□□□ 1.11
VEGFA-208ENST00000417285 HPRP00739 348 aa21.99■■□□□ 1.11
VEGFA-208ENST00000417285 PDLIM4P50479 330 aa21.99■■□□□ 1.11
VEGFA-208ENST00000417285 POU3F1Q03052 451 aaPredicted RBP21.99■■□□□ 1.11
VEGFA-208ENST00000417285 SF3A3Q12874 501 aaKnown RBP eCLIP21.99■■□□□ 1.119e-12■■■■■ 32
VEGFA-208ENST00000417285 ADIPOQQ15848 244 aa21.99■■□□□ 1.11
VEGFA-208ENST00000417285 HSP90B2PQ58FF3 399 aa21.99■■□□□ 1.11
VEGFA-208ENST00000417285 REP15Q6BDI9 236 aa21.99■■□□□ 1.11
VEGFA-208ENST00000417285 CGB2Q6NT52 195 aa21.99■■□□□ 1.11
VEGFA-208ENST00000417285 NHLRC1Q6VVB1 395 aa21.99■■□□□ 1.11
VEGFA-208ENST00000417285 CCDC80Q76M96 950 aa21.99■■□□□ 1.11
VEGFA-208ENST00000417285 SLC46A3Q7Z3Q1 461 aa21.99■■□□□ 1.11
VEGFA-208ENST00000417285 ADAMTS16Q8TE57 1224 aa21.99■■□□□ 1.11
VEGFA-208ENST00000417285 ZNF837Q96EG3 531 aaPredicted RBP21.99■■□□□ 1.11
VEGFA-208ENST00000417285 PLK3Q9H4B4 646 aa21.99■■□□□ 1.11
VEGFA-208ENST00000417285 SAR1AQ9NR31 198 aa21.99■■□□□ 1.11
VEGFA-208ENST00000417285 ZNF446Q9NWS9 450 aa21.99■■□□□ 1.11
VEGFA-208ENST00000417285 CHD3Q12873 2000 aaKnown RBP21.98■■□□□ 1.11
VEGFA-208ENST00000417285 SLC35F4A4IF30 521 aa21.98■■□□□ 1.11
VEGFA-208ENST00000417285 TRAPPC13A5PLN9 417 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms