RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 CIPCQ9C0C6 399 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 NAA50Q9GZZ1 169 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 PCBD2Q9H0N5 130 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 DSN1Q9H410 356 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 C11orf49Q9H6J7 331 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 ALG9Q9H6U8 611 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 TLE6Q9H808 572 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 PNRC2Q9NPJ4 139 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 PRDM7Q9NQW5 492 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 FBXO6Q9NRD1 293 aaPredicted RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 INIPQ9NRY2 104 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 STARD5Q9NSY2 213 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 DCAF13Q9NV06 445 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 SDHAF2Q9NX18 166 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 GIN1Q9NXP7 522 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 TAS2R1Q9NYW7 299 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 GALPQ9UBC7 116 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 SMPXQ9UHP9 88 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 FARSAQ9Y285 508 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 AK6Q9Y3D8 172 aaKnown RBP2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 MTCH2Q9Y6C9 303 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 CSNK1G3Q9Y6M4 447 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 AK9Q5TCS8 1911 aa2.77□□□□□ -1.97
CTDSPL-203ENST00000416688 NUP160Q12769 1436 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 LRIT2A6NDA9 550 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 ZNF233A6NK53 670 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 EFCAB7A8K855 629 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 C2CD4DB7Z1M9 353 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 E9PAM4 449 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 LMO7DNF2Z398 122 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 TSTD3H0UI37 97 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 H7C2Y5 167 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 RHODO00212 210 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 CCRL2O00421 344 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 PLPP1O14494 284 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 ADAM10O14672 748 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 EI24O14681 340 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 PFDN6O15212 129 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 SURF4O15260 269 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 CRXO43186 299 aaPredicted RBP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 NARSO43776 548 aaKnown RBP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 HYAL3O43820 417 aaPredicted RBP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 SOX15O60248 233 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 CDC40O60508 579 aaKnown RBP eCLIP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 CST8O60676 142 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 PEX10O60683 326 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 SHOX2O60902 331 aaPredicted RBP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 MPDU1O75352 247 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 BCAR3O75815 825 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 CEACAM4O75871 244 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 OR2B3O76000 313 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 AQP8O94778 261 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 SOX30O94993 753 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 ATP6V1G2O95670 118 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 CD160O95971 181 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 CA1P00915 261 aaPredicted RBP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 RLN2P04090 185 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 NGFRP08138 427 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 ELANEP08246 267 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 ZNF35P13682 527 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 MGMTP16455 207 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 CSNK2A2P19784 350 aaPredicted RBP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 PVALBP20472 110 aaPredicted RBP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 ATP5A1P25705 553 aaKnown RBP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 TIMP3P35625 211 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 PIGAP37287 484 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 RPS19P39019 145 aaKnown RBP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 VHLP40337 213 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 LEPP41159 167 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 GABRA4P48169 554 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 GSSP48637 474 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 ACOT2P49753 483 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 PGFP49763 221 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 RHOAP61586 193 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 RPS15AP62244 130 aaKnown RBP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 HMGCS1Q01581 520 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 POU3F1Q03052 451 aaPredicted RBP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 ARL16Q0P5N6 197 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 ELAVL2Q12926 359 aaKnown RBP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 MLLT11Q13015 90 aaPredicted RBP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 ITPK1Q13572 414 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 GNMTQ14749 295 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 MAD2L1BPQ15013 274 aaPredicted RBP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 GABRA6Q16445 453 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 NDUFA9Q16795 377 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 DUOXA1Q1HG43 343 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 LRRC36Q1X8D7 754 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 ZNF658BQ4V348 819 aaPredicted RBP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 KLHL12Q53G59 568 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 EIPR1Q53HC9 387 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 SLC35D3Q5M8T2 416 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 PRR31Q5SQ13 230 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 B3GNTL1Q67FW5 361 aaPredicted RBP2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 STEAP1BQ6NZ63 245 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 CD200R1LQ6Q8B3 271 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 BTNL3Q6UXE8 466 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 RAD9BQ6WBX8 426 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 IDO2Q6ZQW0 420 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 LINC00336Q6ZUF6 198 aa2.76□□□□□ -1.97
CTDSPL-203ENST00000416688 TTLL10Q6ZVT0 673 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms