RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 SERPINI2O75830 405 aa15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 H1F0P07305 194 aaKnown RBP15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 IFI30P13284 250 aa15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 FOXG1P55316 489 aaPredicted RBP15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 SH3BGRP55822 239 aaPredicted RBP15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 DGCR6Q14129 220 aa15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 C9orf135Q5VTT2 229 aa15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 HMBOX1Q6NT76 420 aa15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 ZNF730Q6ZMV8 503 aa15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 RRM2BQ7LG56 351 aa15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 TSEN54Q7Z6J9 526 aaKnown RBP15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 PLPPR2Q96GM1 343 aa15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 LRR1Q96L50 414 aa15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 ADAD1Q96M93 576 aaKnown RBP15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 PIP5K1AQ99755 562 aa15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 ESRP2Q9H6T0 727 aaKnown RBP15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 MED29Q9NX70 200 aa15.83■□□□□ 0.12
SEMA3B-201ENST00000416295 SLC35F4A4IF30 521 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 RPL36A-HNRNPH2H7BZ11 118 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 PIP5K1CO60331 668 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 PDE5AO76074 875 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 SEMG1P04279 462 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 IFNGR1P15260 489 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 LOXP28300 417 aaPredicted RBP15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 VLDLRP98155 873 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 ROR2Q01974 943 aaKnown RBP15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 LGALS3BPQ08380 585 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 DNAL1Q4LDG9 190 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 KLHL24Q6TFL4 600 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 NHLRC1Q6VVB1 395 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 MBOAT2Q6ZWT7 520 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 SLC35D2Q76EJ3 337 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 NRMQ8IXM6 262 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 CDK20Q8IZL9 346 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 OR52N5Q8NH56 324 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 POP5Q969H6 163 aaKnown RBP15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 BOD1Q96IK1 185 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 HS3ST6Q96QI5 342 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 EMC6Q9BV81 110 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 PLEKHF2Q9H8W4 249 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 B3GAT2Q9NPZ5 323 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 AMDHD2Q9Y303 409 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 SPG11Q96JI7 2443 aa15.82■□□□□ 0.12
SEMA3B-201ENST00000416295 A0A087WUU8 490 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 GYG2O15488 501 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 STAMBPO95630 424 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 SAGP10523 405 aaPredicted RBP15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 CDH2P19022 906 aaPredicted RBP15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 FUT4P22083 530 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 SMIM11AP58511 58 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 PRKCDQ05655 676 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 RPL18Q07020 188 aaKnown RBP15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 TRIM25Q14258 630 aaKnown RBP15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 ANKDD1AQ495B1 522 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 FGD3Q5JSP0 725 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 CARD17Q5XLA6 110 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 LCN8Q6JVE9 175 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 SEZ6L2Q6UXD5 910 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 CYP2R1Q6VVX0 501 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 LINGO2Q7L985 606 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 HDDC2Q7Z4H3 204 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 DHFR2Q86XF0 187 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 C20orf196Q8IYI0 205 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 OR6X1Q8NH79 312 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 NRGNQ92686 78 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 NINJ1Q92982 152 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 TXNDC15Q96J42 360 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 IL1RAPQ9NPH3 570 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 OBP2BQ9NPH6 170 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 SLC17A5Q9NRA2 495 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 ST6GALNAC2Q9UJ37 374 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 TMEM5Q9Y2B1 443 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 MAGED1Q9Y5V3 778 aaPredicted RBP15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 SLC25A15Q9Y619 301 aa15.81■□□□□ 0.12
SEMA3B-201ENST00000416295 A0A1W2PPR1 153 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 A0A1W2PRG6 482 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 EFCAB9A8MZ26 197 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 BCL10O95999 233 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 FABP3P05413 133 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 TSPAN19P0C672 248 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 ATP6V1B2P21281 511 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 SLC9A3P48764 834 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 DAP3P51398 398 aaKnown RBP15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 BIDP55957 195 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 PRPS1P60891 318 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 CAMK2DQ13557 499 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 NCMAPQ5T1S8 102 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 ANKRD16Q6P6B7 361 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 KLHL17Q6TDP4 642 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 PAMR1Q6UXH9 720 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 OR1K1Q8NGR3 316 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 OR6N1Q8NGY5 312 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 SLC7A13Q8TCU3 470 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 CCDC124Q96CT7 223 aaKnown RBP15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 ASB9Q96DX5 294 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 DHRS1Q96LJ7 313 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 ZNF347Q96SE7 839 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 THTPAQ9BU02 230 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 CRLF2Q9HC73 371 aa15.8■□□□□ 0.12
SEMA3B-201ENST00000416295 GPR35Q9HC97 309 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms