RNA–Protein interactions for RNA: ENST00000416208.5

SCAP-203, Transcript of SREBF chaperone, humanhuman

TSL 5

Gene SCAP, Length 1,222 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-203ENST00000416208 TMEM43Q9BTV4 400 aa16.44■□□□□ 0.22
SCAP-203ENST00000416208 CA10Q9NS85 328 aa16.44■□□□□ 0.22
SCAP-203ENST00000416208 B3GNT2Q9NY97 397 aa16.44■□□□□ 0.22
SCAP-203ENST00000416208 MRPL39Q9NYK5 338 aaKnown RBP16.44■□□□□ 0.22
SCAP-203ENST00000416208 USP22Q9UPT9 525 aa16.44■□□□□ 0.22
SCAP-203ENST00000416208 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.44■□□□□ 0.221e-6■■■□□ 16.4
SCAP-203ENST00000416208 SLC35F4A4IF30 521 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 FXYD1O00168 92 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 FMO6PO60774 539 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 F12P00748 615 aaPredicted RBP16.43■□□□□ 0.22
SCAP-203ENST00000416208 IGFBP1P08833 259 aaPredicted RBP16.43■□□□□ 0.22
SCAP-203ENST00000416208 CBR1P16152 277 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 SH3BGRP55822 239 aaPredicted RBP16.43■□□□□ 0.22
SCAP-203ENST00000416208 POU3F1Q03052 451 aaPredicted RBP16.43■□□□□ 0.22
SCAP-203ENST00000416208 RBBP4Q09028 425 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 NFYCQ13952 458 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 MSMPQ1L6U9 139 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 TMEM249Q2WGJ8 235 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 C3orf36Q3SXR2 165 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 ENTPD8Q5MY95 495 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 CLEC2AQ6UVW9 174 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 MDP1Q86V88 176 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 UEVLDQ8IX04 471 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 GPR137CQ8N3F9 429 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 ANKS4BQ8N8V4 417 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 SCAIQ8N9R8 606 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 BHLHE22Q8NFJ8 381 aaPredicted RBP16.43■□□□□ 0.22
SCAP-203ENST00000416208 OR10A6Q8NH74 314 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 ZNF75AQ96N20 296 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 ZNF317Q96PQ6 595 aaPredicted RBP16.43■□□□□ 0.22
SCAP-203ENST00000416208 YAE1D1Q9NRH1 226 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 ZNF224Q9NZL3 707 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 CORINQ9Y5Q5 1042 aa16.43■□□□□ 0.22
SCAP-203ENST00000416208 TMEM129A0AVI4 362 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 CPSF4LA6NMK7 179 aaKnown RBP16.42■□□□□ 0.22
SCAP-203ENST00000416208 ANGPT2O15123 496 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 OR4A8P0C604 315 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 HOXB1P14653 301 aaPredicted RBP16.42■□□□□ 0.22
SCAP-203ENST00000416208 NQO1P15559 274 aaKnown RBP16.42■□□□□ 0.22
SCAP-203ENST00000416208 SERPINF1P36955 418 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 IDH3GP51553 393 aaPredicted RBP16.42■□□□□ 0.22
SCAP-203ENST00000416208 NCALDP61601 193 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 IL1RL1Q01638 556 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 CHRNB3Q05901 458 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 LOXL1Q08397 574 aaPredicted RBP16.42■□□□□ 0.22
SCAP-203ENST00000416208 PUDPQ08623 228 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 SF3A3Q12874 501 aaKnown RBP eCLIP16.42■□□□□ 0.221e-8■■■■■ 39.1
SCAP-203ENST00000416208 PMS2P3Q13401 168 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 CAMK2DQ13557 499 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 SWT1Q5T5J6 900 aaKnown RBP16.42■□□□□ 0.22
SCAP-203ENST00000416208 ZNF613Q6PF04 617 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 VHLLQ6RSH7 139 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 LRRC17Q8N6Y2 441 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 PIK3C3Q8NEB9 887 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 VANGL1Q8TAA9 524 aaPredicted RBP16.42■□□□□ 0.22
SCAP-203ENST00000416208 TSPEARQ8WU66 669 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 TNFRSF13CQ96RJ3 184 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 PRSS27Q9BQR3 290 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 TMEM120AQ9BXJ8 343 aa16.42■□□□□ 0.22
SCAP-203ENST00000416208 IGHV2OR16-5A0A0B4J2B6 119 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 ZNF99A8MXY4 864 aaPredicted RBP16.41■□□□□ 0.22
SCAP-203ENST00000416208 VWC2LB2RUY7 222 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 HLA-HP01893 362 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 CRYAAP02489 173 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 C8BP07358 591 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 PCGF2P35227 344 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 THBS4P35443 961 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 DSCR9P59020 149 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 RABL3Q5HYI8 236 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 NANOGP8Q6NSW7 305 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 RANBP3LQ86VV4 465 aaPredicted RBP16.41■□□□□ 0.22
SCAP-203ENST00000416208 CALHM3Q86XJ0 350 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 FAM168AQ92567 244 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 EPYCQ99645 322 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 ZNF426Q9BUY5 554 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 ASPNQ9BXN1 380 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 PLK3Q9H4B4 646 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 NANOGQ9H9S0 305 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 TAS2R5Q9NYW4 299 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 SLC13A4Q9UKG4 626 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 PMF1-BGLAPU3KQ54 211 aa16.41■□□□□ 0.22
SCAP-203ENST00000416208 CHP2O43745 196 aa16.4■□□□□ 0.22
SCAP-203ENST00000416208 TLX2O43763 284 aaPredicted RBP16.4■□□□□ 0.22
SCAP-203ENST00000416208 SERPINI2O75830 405 aa16.4■□□□□ 0.22
SCAP-203ENST00000416208 MFSD13AQ14CX5 517 aa16.4■□□□□ 0.22
SCAP-203ENST00000416208 EFNB3Q15768 340 aa16.4■□□□□ 0.22
SCAP-203ENST00000416208 ZNF74Q16587 644 aa16.4■□□□□ 0.22
SCAP-203ENST00000416208 VMACQ2NL98 169 aa16.4■□□□□ 0.22
SCAP-203ENST00000416208 C6orf52Q5T4I8 152 aa16.4■□□□□ 0.22
SCAP-203ENST00000416208 CCDC80Q76M96 950 aa16.4■□□□□ 0.22
SCAP-203ENST00000416208 ZNF627Q7L945 461 aa16.4■□□□□ 0.22
SCAP-203ENST00000416208 PXKQ7Z7A4 578 aa16.4■□□□□ 0.22
SCAP-203ENST00000416208 HIPK1Q86Z02 1210 aa16.4■□□□□ 0.22
SCAP-203ENST00000416208 ZCCHC24Q8N2G6 241 aaKnown RBP16.4■□□□□ 0.22
SCAP-203ENST00000416208 C10orf53Q8N6V4 93 aa16.4■□□□□ 0.22
SCAP-203ENST00000416208 ADAMTS16Q8TE57 1224 aa16.4■□□□□ 0.22
SCAP-203ENST00000416208 MS4A3Q96HJ5 214 aa16.4■□□□□ 0.22
SCAP-203ENST00000416208 LRR1Q96L50 414 aa16.4■□□□□ 0.22
SCAP-203ENST00000416208 PCDHAC1Q9H158 963 aa16.4■□□□□ 0.22
SCAP-203ENST00000416208 EVA1AQ9H8M9 152 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms