RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 RETREG3Q86VR2 466 aa15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 C20orf196Q8IYI0 205 aa15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 C10orf53Q8N6V4 93 aa15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 C10orf105Q8TEF2 133 aa15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 ARHGDIGQ99819 225 aa15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 NPHS2Q9NP85 383 aa15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 B3GAT2Q9NPZ5 323 aa15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 NOX1Q9Y5S8 564 aa15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 FKBP7Q9Y680 259 aa15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 YLPM1P49750 1951 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-208ENST00000416159 A8MV72 311 aaPredicted RBP15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 M0R3G1 203 aa15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 M0R3H8 397 aa15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 HPRP00739 348 aa15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 MT-ATP6P00846 226 aa15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 HLA-DOBP13765 273 aa15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 PDLIM4P50479 330 aa15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 MTPNP58546 118 aa15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 SELPLGQ14242 412 aa15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 TMEM249Q2WGJ8 235 aa15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 LINC00114Q6XXX2 140 aa15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 PATL1Q86TB9 770 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 HIPK1Q86Z02 1210 aa15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 NUP37Q8NFH4 326 aa15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 IL17RDQ8NFM7 739 aa15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 ZNF837Q96EG3 531 aaPredicted RBP15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 KAT8Q9H7Z6 458 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 FBXO9Q9UK97 447 aaPredicted RBP15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 USP22Q9UPT9 525 aa15.28■□□□□ 0.04
PDLIM2-208ENST00000416159 SLC35F4A4IF30 521 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 ZNF726A6NNF4 738 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 PLPP3O14495 311 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 CHP2O43745 196 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 OPN1SWP03999 348 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 AHCYP23526 432 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 CALCRP30988 508 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 IDH3GP51553 393 aaPredicted RBP15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 VLDLRP98155 873 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 POU3F1Q03052 451 aaPredicted RBP15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 PUDPQ08623 228 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 EFNB3Q15768 340 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 ADIPOQQ15848 244 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 PHYHD1Q5SRE7 291 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 INTS11Q5TA45 600 aaKnown RBP15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 CARD17Q5XLA6 110 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 VHLLQ6RSH7 139 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 NHLRC1Q6VVB1 395 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 PXKQ7Z7A4 578 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 SNX32Q86XE0 403 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 GPR32P1Q8NGA4 272 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 OR5J2Q8NH18 312 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 SLC26A7Q8TE54 656 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 NANOS1Q8WY41 292 aaKnown RBP15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 TXNDC15Q96J42 360 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 MOGAT1Q96PD6 335 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 EMC6Q9BV81 110 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 SEC61A2Q9H9S3 476 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 MED29Q9NX70 200 aa15.27■□□□□ 0.04
PDLIM2-208ENST00000416159 A0A0G2JND7 137 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 NDUFS8O00217 210 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 CELA3BP08861 270 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 OR4A8P0C604 315 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 USF1P22415 310 aaPredicted RBP15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 PCGF2P35227 344 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 CAPZA2P47755 286 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 HGFACQ04756 655 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 ENTPD8Q5MY95 495 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 SLC46A3Q7Z3Q1 461 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 OR6T1Q8NGN1 323 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 OR6N1Q8NGY5 312 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 OR10A6Q8NH74 314 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 SORCS2Q96PQ0 1159 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 MDFIQ99750 246 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 VRK1Q99986 396 aaPredicted RBP15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 PLK3Q9H4B4 646 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 ZNF442Q9H7R0 627 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 MYOZ1Q9NP98 299 aaPredicted RBP15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 POFUT2Q9Y2G5 429 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 RTTNQ86VV8 2226 aa15.26■□□□□ 0.03
PDLIM2-208ENST00000416159 IGHV2OR16-5A0A0B4J2B6 119 aa15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 CPSF4LA6NMK7 179 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 LRRN3E7EW58 273 aa15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 LY6HO94772 140 aa15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 OR6A2O95222 327 aa15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 IFNA2P01563 188 aa15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 VIMP08670 466 aaKnown RBP15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 ADORA3P0DMS8 318 aa15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 H2AFXP16104 143 aaPredicted RBP15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 NPRL3Q12980 569 aa15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 CYLC2Q14093 348 aaPredicted RBP15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 NPTX1Q15818 432 aa15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 C6orf52Q5T4I8 152 aa15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 CYB5R2Q6BCY4 276 aa15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 TTC33Q6PID6 262 aaPredicted RBP15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 ZNF627Q7L945 461 aa15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 MDP1Q86V88 176 aa15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 RASSF5Q8WWW0 418 aa15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 MPP4Q96JB8 637 aa15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 RAB1BQ9H0U4 201 aa15.25■□□□□ 0.03
PDLIM2-208ENST00000416159 MRGBPQ9NV56 204 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms