RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 ULBP3Q9BZM4 244 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 TRIM2Q9C040 744 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 ZNF281Q9Y2X9 895 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 B8ZZF3 427 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 SSNA1O43805 119 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 GLCEO94923 617 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 AK1P00568 194 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 GUSBP08236 651 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 ATF4P18848 351 aaPredicted RBP8.97□□□□□ -0.97
SS18-203ENST00000415083 KIR3DL2P43630 455 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 PITPNAQ00169 270 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 GUCA2AQ02747 115 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 SLC22A10Q63ZE4 541 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 OR7E24Q6IFN5 339 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 LEG1Q6P5S2 330 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 LRRC69Q6ZNQ3 347 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 ATG4DQ86TL0 474 aaPredicted RBP8.97□□□□□ -0.97
SS18-203ENST00000415083 OR6V1Q8N148 313 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 FTMTQ8N4E7 242 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 PMM1Q92871 262 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 CXorf58Q96LI9 332 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 C7orf50Q9BRJ6 194 aaKnown RBP8.97□□□□□ -0.97
SS18-203ENST00000415083 EXOSC3Q9NQT5 275 aaKnown RBP8.97□□□□□ -0.97
SS18-203ENST00000415083 HRASLS2Q9NWW9 162 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 COPZ2Q9P299 210 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 MGAT4CQ9UBM8 478 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 POMT2Q9UKY4 750 aa8.97□□□□□ -0.97
SS18-203ENST00000415083 FER1L5A0AVI2 2057 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 A0A1B0GTQ1 180 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 A0A1B0GUH1 482 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 TVP23AA6NH52 213 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 TRIM77I1YAP6 450 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 PYCARD-AS1I3L0S3 204 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 CTNSO60931 367 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 ARL6IP5O75915 188 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 OR2A4O95047 310 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 RPP14O95059 124 aaKnown RBP8.96□□□□□ -0.97
SS18-203ENST00000415083 APBB3O95704 486 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 SERPINA3P01011 423 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 F13BP05160 661 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 HOXB2P14652 356 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 TAS2R20P59543 309 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 EIF2B5Q13144 721 aaKnown RBP8.96□□□□□ -0.97
SS18-203ENST00000415083 IL10RAQ13651 578 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 ANGPT1Q15389 498 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 DCAF12L2Q5VW00 463 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 LIPNQ5VXI9 398 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 IDO2Q6ZQW0 420 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 CDC20BQ86Y33 519 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 ZNF433Q8N7K0 673 aaPredicted RBP8.96□□□□□ -0.97
SS18-203ENST00000415083 GPBAR1Q8TDU6 330 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 ASB12Q8WXK4 309 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 HAVCR1Q96D42 359 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 CMTM3Q96MX0 182 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 OR2A7Q96R45 310 aa8.96□□□□□ -0.97
SS18-203ENST00000415083 ELF4Q99607 663 aaPredicted RBP8.96□□□□□ -0.97
SS18-203ENST00000415083 TRBV5-7A0A0A0MS05 114 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 A0A0J9YY10 115 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 OR4C45A6NMZ5 311 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 SIX6O95475 246 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 ASAH2BP0C7U1 165 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 SOX2P48431 317 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 DLX2Q07687 328 aaPredicted RBP8.96□□□□□ -0.98
SS18-203ENST00000415083 CBFBQ13951 182 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 PON3Q15166 354 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 ZNF74Q16587 644 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 PRTGQ2VWP7 1150 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 C1QL3Q5VWW1 255 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 KIAA1324Q6UXG2 1013 aaKnown RBP8.96□□□□□ -0.98
SS18-203ENST00000415083 ZNF671Q8TAW3 534 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 KTI12Q96EK9 354 aaPredicted RBP8.96□□□□□ -0.98
SS18-203ENST00000415083 CYYR1Q96J86 154 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 TSPAN32Q96QS1 320 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 CHST6Q9GZX3 395 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 NOX3Q9HBY0 568 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 V9GY05 133 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 COL5A1P20908 1838 aaPredicted RBP8.96□□□□□ -0.98
SS18-203ENST00000415083 A0A1B0GVI7 797 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 SERINC4A6NH21 518 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 IFNGP01579 166 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 GABRA4P48169 554 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 YOD1Q5VVQ6 348 aaPredicted RBP8.96□□□□□ -0.98
SS18-203ENST00000415083 ZNF626Q68DY1 528 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 Q6ZSR6 202 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 LUZP2Q86TE4 346 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 GPAT4Q86UL3 456 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 TMEM151BQ8IW70 566 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 RIT1Q92963 219 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 RERGQ96A58 199 aaPredicted RBP8.96□□□□□ -0.98
SS18-203ENST00000415083 HIF3AQ9Y2N7 669 aa8.96□□□□□ -0.98
SS18-203ENST00000415083 NUPL2O15504 423 aaKnown RBP8.95□□□□□ -0.98
SS18-203ENST00000415083 SERPINI2O75830 405 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 KDM4BO94953 1096 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 IGHV4-34P06331 123 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 TPMTP51580 245 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 SKP2Q13309 424 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 NKAIN2Q5VXU1 208 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 SLC25A25Q6KCM7 469 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 ZNF595Q8IYB9 648 aa8.95□□□□□ -0.98
SS18-203ENST00000415083 METTL27Q8N6F8 245 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms