RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 OPRL1P41146 370 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 ATP5IP56385 69 aaPredicted RBP2.18□□□□□ -2.06
MCF2-204ENST00000414978 OR1D5P58170 312 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 PON2Q15165 354 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 C18orf21Q32NC0 220 aaPredicted RBP2.18□□□□□ -2.06
MCF2-204ENST00000414978 ACSF3Q4G176 576 aaPredicted RBP2.18□□□□□ -2.06
MCF2-204ENST00000414978 CARD17Q5XLA6 110 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 ZNF562Q6V9R5 426 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 Q6ZSR9 355 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 CDHR3Q6ZTQ4 885 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 NLRP9Q7RTR0 991 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 CCDC71Q8IV32 467 aaPredicted RBP2.18□□□□□ -2.06
MCF2-204ENST00000414978 C12orf56Q8IXR9 622 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 DCP1BQ8IZD4 617 aaKnown RBP2.18□□□□□ -2.06
MCF2-204ENST00000414978 MCOLN2Q8IZK6 566 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 Q8N1X5 172 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 TMEM161BQ8NDZ6 487 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 BHLHE22Q8NFJ8 381 aaPredicted RBP2.18□□□□□ -2.06
MCF2-204ENST00000414978 TSTD1Q8NFU3 115 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 SPATA3Q8NHX4 192 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 ANGPTL6Q8NI99 470 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 OR5B12Q96R08 314 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 EPYCQ99645 322 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 TSGA10Q9BZW7 698 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 UGT1A10Q9HAW8 530 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 DMAC2Q9NW81 257 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 NLGN3Q9NZ94 848 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 ABCA7Q8IZY2 2146 aa2.18□□□□□ -2.06
MCF2-204ENST00000414978 TNRC6AQ8NDV7 1962 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 GOLGA8IPA6NC78 632 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 GOLGA8JA6NMD2 632 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 PRAC2D3DTV9 90 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 ZNF701M0R085 212 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 CCL16O15467 120 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 RS1O15537 224 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 RNASEH1O60930 286 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 IGSF6O95976 241 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 AGTP01019 485 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 TSHBP01222 138 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 NGFRP08138 427 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 TRIM49P0CI25 452 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 TRIM49CP0CI26 452 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 POU2F1P14859 743 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 UCHL3P15374 230 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 AMD1P17707 334 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 XRCC1P18887 633 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 SLC2A5P22732 501 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 MMP12P39900 470 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 CDKN2AP42771 156 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 OR3A2P47893 321 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 CCT3P49368 545 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 UBE2MP61081 183 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 NTHL1P78549 312 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 NCBP1Q09161 790 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 CRMP1Q14194 572 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 EIF2B1Q14232 305 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 SLC17A1Q14916 467 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 EXOC3L2Q2M3D2 409 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 KLHL22Q53GT1 634 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 BEX5Q5H9J7 111 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 LY6G6FQ5SQ64 297 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 WDR59Q6PJI9 974 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 PAQR6Q6TCH4 344 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 APOOLQ6UXV4 268 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 CHMP1BQ7LBR1 199 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 TRPM8Q7Z2W7 1104 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 VPS36Q86VN1 386 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 VRK2Q86Y07 508 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 ZBTB8OSQ8IWT0 167 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 LRRC34Q8IZ02 419 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 OR4Q3Q8NH05 313 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 FANK1Q8TC84 345 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 C2orf15Q8WU43 125 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 OVOL2Q9BRP0 275 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 HINT2Q9BX68 163 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 KRTAP17-1Q9BYP8 105 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 LRRN3Q9H3W5 708 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 ATP13A3Q9H7F0 1226 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 SP140LQ9H930 580 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 NEK6Q9HC98 313 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 ASCL3Q9NQ33 180 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 XPNPEP1Q9NQW7 623 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 ZNF275Q9NSD4 429 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 IL36RNQ9UBH0 155 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 IL36AQ9UHA7 158 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 GUCA1BQ9UMX6 200 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 MRPS28Q9Y2Q9 187 aaKnown RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 WIPI2Q9Y4P8 454 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 CACNA1EQ15878 2313 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 LOC100506127A0A0U1RQW1 187 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 GAGE12JA6NER3 117 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 ANKRD63C9JTQ0 380 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 DYNC1I1O14576 645 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 ZW10O43264 779 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 SYNGR3O43761 229 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 NOL4O94818 638 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 CT45A8P0DMV1 189 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 CT45A9P0DMV2 189 aa2.17□□□□□ -2.06
MCF2-204ENST00000414978 FGF3P11487 239 aaPredicted RBP2.17□□□□□ -2.06
MCF2-204ENST00000414978 ATP1B2P14415 290 aaPredicted RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms