RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 GOLGA6L4A6NEF3 574 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 HELTA6NFD8 242 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 SMCO2A6NFE2 343 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 A8MUI8 341 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 LAD1O00515 517 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 ZBTB5O15062 677 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 TAPBPO15533 448 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 RS1O15537 224 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 NEMFO60524 1076 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 TPST2O60704 377 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 ZNF780AO75290 641 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 GYPCP04921 128 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 HEXBP07686 556 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 HOXC4P09017 264 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 HTR1EP28566 365 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 ADSSP30520 456 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 CA8P35219 290 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 CTRLP40313 264 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 PTGDSP41222 190 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 MPPED2Q15777 294 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 KRTAP13-3Q3SY46 172 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 SLC36A3Q495N2 470 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 GGTA1PQ4G0N0 100 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 HSP90AA4PQ58FG1 418 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 FKBP1CQ5VVH2 108 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 PYHIN1Q6K0P9 492 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 MOB3BQ86TA1 216 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 ACOT1Q86TX2 421 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 NKAPP1Q8N9T2 125 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 DCAF4L2Q8NA75 395 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 C20orf203Q8NBC4 194 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 STXBP6Q8NFX7 210 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 OR56B4Q8NH76 319 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 FAM151AQ8WW52 585 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 CHCHD10Q8WYQ3 142 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 DCUN1D4Q92564 292 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 DNAJC19Q96DA6 116 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 SH3YL1Q96HL8 342 aaPredicted RBP2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 PGLYRP4Q96LB8 373 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 GSDMAQ96QA5 445 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 NRTNQ99748 197 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 TUBGCP2Q9BSJ2 902 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 TPPP3Q9BW30 176 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 NARFLQ9H6Q4 476 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 MMP26Q9NRE1 261 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 PHF11Q9UIL8 331 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 TANC1Q9C0D5 1861 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 CITO14578 2027 aa2.47□□□□□ -2.01
HMGB1P11-201ENST00000413899 PTPRDP23468 1912 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 DOCK3Q8IZD9 2030 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 NLRC5Q86WI3 1866 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 UQCRHLA0A096LP55 91 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 F5H6K3 240 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 KRTAP4-16G5E9R7 235 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 KIF2AO00139 706 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 CXCL13O43927 109 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 TBX19O60806 448 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 TM7SF2O76062 418 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 LGI1O95970 557 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 PCCBP05166 539 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 UQCRHP07919 91 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 EPB41P11171 864 aaKnown RBP2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 PRG2P13727 222 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 MSNP26038 577 aaKnown RBP2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 HMGB2P26583 209 aaKnown RBP2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 FGF9P31371 208 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 LEPP41159 167 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 KLK7P49862 253 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 PPT1P50897 306 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 CSNK1G2P78368 415 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 KLRC3Q07444 240 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 RIPK1Q13546 671 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 SELPLGQ14242 412 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 MESDQ14696 234 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 ZNF630Q2M218 657 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 ZNF658BQ4V348 819 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 C1orf146Q5VVC0 180 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 GDPD3Q7L5L3 318 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 ZDHHC21Q8IVQ6 265 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 SYT14Q8NB59 555 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 SUMF2Q8NBJ7 301 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 OR4D9Q8NGE8 314 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 NELFBQ8WX92 580 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 MYDGFQ969H8 173 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 TRIM44Q96DX7 344 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 DTNBP1Q96EV8 351 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 C12orf42Q96LP6 360 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 ZNF285Q96NJ3 590 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 AMDHD1Q96NU7 426 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 PLIN2Q99541 437 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 GAL3ST1Q99999 423 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 ALG12Q9BV10 488 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 SELENOIQ9C0D9 397 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 NXF5Q9H1B4 397 aaKnown RBP2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 RIBC2Q9H4K1 309 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 VCPKMTQ9H867 229 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 ELOVL3Q9HB03 270 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 C6orf50Q9HD87 102 aa2.46□□□□□ -2.02
HMGB1P11-201ENST00000413899 MYOZ2Q9NPC6 264 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 222.8 ms