RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 NRIP3Q9NQ35 241 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 TAS2R3Q9NYW6 316 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 KLK4Q9Y5K2 254 aa15.91■□□□□ 0.14
PHRF1-202ENST00000413872 B8ZZF3 427 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 NARSO43776 548 aaKnown RBP15.9■□□□□ 0.14
PHRF1-202ENST00000413872 CBX7O95931 251 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 PNLIPRP2P54317 469 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 CXADRP78310 365 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 VWA2Q5GFL6 755 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 SIRT6Q8N6T7 355 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 TMIGD2Q96BF3 282 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 TSPAN10Q9H1Z9 355 aaPredicted RBP15.9■□□□□ 0.14
PHRF1-202ENST00000413872 SDHAF2Q9NX18 166 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 A0A0A6YYH2 397 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 hCG_1809904A0A1W2PP81 198 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 A0A1W2PPE2 198 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 A0A1W2PR64 198 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 A0A1W2PRV1 198 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 A6NJ64 397 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 B4GAT1O43505 415 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 TOXO94900 526 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 TAS2R20P59543 309 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 OR2G6Q5TZ20 316 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 TMEM102Q8N9M5 508 aaPredicted RBP15.9■□□□□ 0.14
PHRF1-202ENST00000413872 SLC35A4Q96G79 324 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 PRRX2Q99811 253 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 TMEM59Q9BXS4 323 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 PLEKHA3Q9HB20 300 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 OR8U9P0C7N5 309 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 BSGP35613 385 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 OR13C9Q8NGT0 318 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 OR52N1Q8NH53 320 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 TAAR9Q96RI9 348 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 LRRC61Q9BV99 259 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 UNKLQ9H9P5 680 aaKnown RBP15.9■□□□□ 0.14
PHRF1-202ENST00000413872 BCL2L10Q9HD36 194 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 CHST11Q9NPF2 352 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 PIAS2O75928 621 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 OR7C1O76099 320 aaPredicted RBP15.9■□□□□ 0.14
PHRF1-202ENST00000413872 F10P00742 488 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 GAAP10253 952 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 EMC4Q5J8M3 183 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 COX15Q7KZN9 410 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 MED20Q9H944 212 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 ANKRD10Q9NXR5 420 aa15.9■□□□□ 0.14
PHRF1-202ENST00000413872 MYO7AQ13402 2215 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 HMGN4O00479 90 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 LCMT2O60294 686 aaKnown RBP15.89■□□□□ 0.13
PHRF1-202ENST00000413872 KCNK2O95069 426 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 HOXC4P09017 264 aaPredicted RBP15.89■□□□□ 0.13
PHRF1-202ENST00000413872 MSMO1Q15800 293 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 NKAIN3Q8N8D7 197 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 KCNE4Q8WWG9 221 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 IL1F10Q8WWZ1 152 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 PRMT8Q9NR22 394 aaPredicted RBP15.89■□□□□ 0.13
PHRF1-202ENST00000413872 RFPL3O75679 317 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 MAKP20794 623 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 CATR1Q13166 79 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 SLC10A1Q14973 349 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 YIF1BQ5BJH7 314 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 FCRL6Q6DN72 434 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 SLC16A9Q7RTY1 509 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 ASCC1Q8N9N2 400 aaKnown RBP15.89■□□□□ 0.13
PHRF1-202ENST00000413872 ZNF707Q96C28 371 aaPredicted RBP15.89■□□□□ 0.13
PHRF1-202ENST00000413872 SEMA4CQ9C0C4 833 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 F5P12259 2224 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 TSPAN4O14817 238 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 OPRL1P41146 370 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 CAV2P51636 162 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 SNRPGP62308 76 aaKnown RBP15.89■□□□□ 0.13
PHRF1-202ENST00000413872 FAM83FQ8NEG4 500 aaPredicted RBP15.89■□□□□ 0.13
PHRF1-202ENST00000413872 TEX37Q96LM6 180 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 ZNF285Q96NJ3 590 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 NOX4Q9NPH5 578 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 LRFN1Q9P244 771 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 OR14J1Q9UGF5 321 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 FAM166BA8MTA8 275 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 F5H5P2 479 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 FZD7O75084 574 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 CISD3P0C7P0 127 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 UBBP0CG47 229 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 SDHBP21912 280 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 PRPH2P23942 346 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 HTR2CP28335 458 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 EIF2S3P41091 472 aaKnown RBP15.89■□□□□ 0.13
PHRF1-202ENST00000413872 CLVS2Q5SYC1 327 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 VHLLQ6RSH7 139 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 S100A7AQ86SG5 101 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 SLC22A24Q8N4F4 322 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 OR7G2Q8NG99 324 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 TMEM106AQ96A25 262 aa15.89■□□□□ 0.13
PHRF1-202ENST00000413872 A0A087WZY1 265 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 H7C1Q1 480 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 GOSR2O14653 212 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 GPR137BO60478 399 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 SCG5P05408 212 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 ZGLP1P0C6A0 271 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 MTNR1BP49286 362 aa15.88■□□□□ 0.13
PHRF1-202ENST00000413872 ALKBH1Q13686 389 aaKnown RBP15.88■□□□□ 0.13
PHRF1-202ENST00000413872 AKR1C8PQ5T2L2 129 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms