RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 MYOTQ9UBF9 498 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 FITM1A5D6W6 292 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 SLC19A2O60779 497 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 VAMP5O95183 116 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 RAB40ALP0C0E4 278 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 FPR3P25089 353 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 S100PP25815 95 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 CD1BP29016 333 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 MTNR1AP48039 350 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ALDH3B2P48448 385 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 GIPRP48546 466 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 CSNK1A1P48729 337 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 UBE2NP61088 152 aaKnown RBP7.81□□□□□ -1.16
SYNE1-211ENST00000413186 CARD17Q5XLA6 110 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ARL9Q6T311 187 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ZER1Q7Z7L7 766 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 MARCH9Q86YJ5 346 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 ACOT12Q8WYK0 555 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 NSMAFQ92636 917 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 MRGPRX4Q96LA9 322 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 TCF7L1Q9HCS4 588 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 SIDT1Q9NXL6 827 aaKnown RBP7.81□□□□□ -1.16
SYNE1-211ENST00000413186 RDH8Q9NYR8 311 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 CHRNA9Q9UGM1 479 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 STUB1Q9UNE7 303 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 THADAQ6YHU6 1953 aa7.81□□□□□ -1.16
SYNE1-211ENST00000413186 OR2AT4A6NND4 320 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 J3KTA2 159 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 J3QLW9 94 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 MITFO75030 526 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-211ENST00000413186 DEDDO75618 318 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 H2BFMP0C1H6 154 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 ZNF19P17023 458 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 ZNF20P17024 532 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 EDNRAP25101 427 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 RPS5P46782 204 aaKnown RBP7.8□□□□□ -1.16
SYNE1-211ENST00000413186 MLLT10P55197 1068 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 GLO1Q04760 184 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 SLC10A1Q14973 349 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.8□□□□□ -1.16
SYNE1-211ENST00000413186 PGGHGQ32M88 737 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 ACER2Q5QJU3 275 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 RAB12Q6IQ22 244 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 B3GNT8Q7Z7M8 397 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 ST7LQ8TDW4 575 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 CPNE2Q96FN4 548 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-211ENST00000413186 HRASLS5Q96KN8 279 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 SECISBP2Q96T21 854 aaKnown RBP7.8□□□□□ -1.16
SYNE1-211ENST00000413186 SAP130Q9H0E3 1048 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 PTTG3PQ9NZH4 202 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 TCF20Q9UGU0 1960 aaKnown RBP7.8□□□□□ -1.16
SYNE1-211ENST00000413186 TRBV4-1A0A0J9YWV2 114 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 CLDN24A6NM45 220 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 DPM1O60762 260 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 IGHG1P01857 330 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 CDK1P06493 297 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 IGFBP1P08833 259 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-211ENST00000413186 ABCD3P28288 659 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 FUT7Q11130 342 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 SQSTM1Q13501 440 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 RAB35Q15286 201 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 C1orf140Q5VVS0 124 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 PLAG1Q6DJT9 500 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 HS3ST5Q8IZT8 346 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 MS4A15Q8N5U1 240 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 STK35Q8TDR2 534 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 SARAFQ96BY9 339 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 LRFN3Q9BTN0 628 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 NUP214P35658 2090 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-211ENST00000413186 GPR179Q6PRD1 2367 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 ASPDHA6ND91 283 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 H3BMQ9 156 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 TBX1O43435 398 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 STSP08842 583 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 MAP3K8P41279 467 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 CARD18P57730 90 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 RAB40BQ12829 278 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 EBPQ15125 230 aaKnown RBP7.8□□□□□ -1.16
SYNE1-211ENST00000413186 PLBD1Q6P4A8 553 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 OLIG3Q7RTU3 272 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 TMEM104Q8NE00 496 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 UCN3Q969E3 161 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 CCDC32Q9BV29 185 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 SH3BGRL2Q9UJC5 107 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 TICRRQ7Z2Z1 1910 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 A0A1B0GVI7 797 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 FTCDNL1E5RQL4 147 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 RAB3DO95716 219 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 CBX7O95931 251 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 F10P00742 488 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 LIPCP11150 499 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 FCGR2AP12318 317 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 S1PR1P21453 382 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 ENPP1P22413 925 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 IL32P24001 234 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 MNDAP41218 407 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 ENTPD1P49961 510 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 IDH3GP51553 393 aaPredicted RBP7.8□□□□□ -1.16
SYNE1-211ENST00000413186 SLC18B1Q6NT16 456 aa7.8□□□□□ -1.16
SYNE1-211ENST00000413186 BAIAP2L2Q6UXY1 529 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms