RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ACHEP22303 614 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 CBLP22681 906 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 COL8A2P25067 703 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 EPHA3P29320 983 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 GRPRP30550 384 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 GLRXP35754 106 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 TMEM33P57088 247 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 ACTG1P63261 375 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 GALK2Q01415 458 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 ZNF813Q6ZN06 617 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 UEVLDQ8IX04 471 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 C20orf196Q8IYI0 205 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 TMEM123Q8N131 208 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 C3orf56Q8N813 242 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 SEMA6DQ8NFY4 1073 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 MGARPQ8TDB4 240 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 GCDHQ92947 438 aaPredicted RBP14.38□□□□□ -0.11
MRPL55-220ENST00000411464 MS4A3Q96HJ5 214 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 ITCHQ96J02 903 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 PAIP2Q9BPZ3 127 aaKnown RBP14.38□□□□□ -0.11
MRPL55-220ENST00000411464 SYT3Q9BQG1 590 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 C12orf10Q9HB07 376 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 LPAR2Q9HBW0 351 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 KCNK9Q9NPC2 374 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 B3GAT2Q9NPZ5 323 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 POFUT2Q9Y2G5 429 aa14.38□□□□□ -0.11
MRPL55-220ENST00000411464 TRAV36DV7A0A075B6V5 113 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 HDAC3O15379 428 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 TRAF3IP2O43734 574 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-220ENST00000411464 TFP02787 698 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 HPXP02790 462 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 ZNF35P13682 527 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 ALDH3B1P43353 468 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 PTDSS1P48651 473 aaKnown RBP14.37□□□□□ -0.11
MRPL55-220ENST00000411464 RPS23P62266 143 aaKnown RBP14.37□□□□□ -0.11
MRPL55-220ENST00000411464 BST1Q10588 318 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 PDCD4Q53EL6 469 aaKnown RBP14.37□□□□□ -0.11
MRPL55-220ENST00000411464 PHYHD1Q5SRE7 291 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 NXNQ6DKJ4 435 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 FAHD2BQ6P2I3 314 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-220ENST00000411464 C6orf89Q6UWU4 347 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 CARM1Q86X55 608 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 SNX32Q86XE0 403 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 DNAJA4Q8WW22 397 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-220ENST00000411464 FAHD2AQ96GK7 314 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 LRR1Q96L50 414 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 LRRC37BQ96QE4 947 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 BCL2L10Q9HD36 194 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 TREM2Q9NZC2 230 aa14.37□□□□□ -0.11
MRPL55-220ENST00000411464 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.37□□□□□ -0.11
MRPL55-220ENST00000411464 V9GYY5 206 aaPredicted RBP14.37□□□□□ -0.11
MRPL55-220ENST00000411464 FAM157AC9JC47 383 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 PPIHO43447 177 aaKnown RBP14.36□□□□□ -0.11
MRPL55-220ENST00000411464 FZD7O75084 574 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 RAB36O95755 333 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 GAAP10253 952 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 ZNF14P17017 642 aaPredicted RBP14.36□□□□□ -0.11
MRPL55-220ENST00000411464 LSP1P33241 339 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 SEC24CP53992 1094 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 AQP5P55064 265 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 MFSD13AQ14CX5 517 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 MSMPQ1L6U9 139 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 GTDC1Q4AE62 458 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 ALG10BQ5I7T1 473 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 C6orf10Q5SRN2 563 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 TEX29Q8N6K0 151 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 LSMEM1Q8N8F7 131 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 ADPRHL1Q8NDY3 354 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 OR51F2Q8NH61 342 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 BBS10Q8TAM1 723 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 RNF217Q8TC41 542 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 AENQ8WTP8 325 aaKnown RBP14.36□□□□□ -0.11
MRPL55-220ENST00000411464 ZMYND19Q96E35 227 aaPredicted RBP14.36□□□□□ -0.11
MRPL55-220ENST00000411464 EMC6Q9BV81 110 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 RACGAP1Q9H0H5 632 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 CENPHQ9H3R5 247 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 DENND2DQ9H6A0 471 aaPredicted RBP14.36□□□□□ -0.11
MRPL55-220ENST00000411464 DUSP13Q9UII6 198 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 FZR1Q9UM11 496 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 PCDHB10Q9UN67 800 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 CORINQ9Y5Q5 1042 aa14.36□□□□□ -0.11
MRPL55-220ENST00000411464 A0A1B0GWA3 101 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 ZNF726A6NNF4 738 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 C5orf58C9J3I9 102 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 MS4A18H0YCH9 400 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 WIPF1O43516 503 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 RGS9O75916 674 aaPredicted RBP14.35□□□□□ -0.11
MRPL55-220ENST00000411464 NUDT7P0C024 238 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 HLA-DOBP13765 273 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 ANPEPP15144 967 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 GIPRP48546 466 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 COMPP49747 757 aaPredicted RBP14.35□□□□□ -0.11
MRPL55-220ENST00000411464 RAB1AP62820 205 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 MRPS11P82912 194 aaKnown RBP14.35□□□□□ -0.11
MRPL55-220ENST00000411464 MPP2Q14168 576 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 MAD2L1BPQ15013 274 aaPredicted RBP14.35□□□□□ -0.11
MRPL55-220ENST00000411464 RGNQ15493 299 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 MS4A18Q3C1V0 323 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 THSD4Q6ZMP0 1018 aa14.35□□□□□ -0.11
MRPL55-220ENST00000411464 MSANTD1Q6ZTZ1 278 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms