RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 RPEL1Q2QD12 228 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 MOGAT2Q3SYC2 334 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 ZNF470Q6ECI4 717 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 CTRB2Q6GPI1 263 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 PWWP2BQ6NUJ5 590 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 PRMT9Q6P2P2 845 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 EMBQ6PCB8 327 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 SPSB3Q6PJ21 355 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 TMPRSS11AQ6ZMR5 421 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 BHLHA15Q7RTS1 189 aaPredicted RBP3.98□□□□□ -1.77
LSM5-205ENST00000409952 ZFAND4Q86XD8 727 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 EID2Q8N6I1 236 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 ACOT4Q8N9L9 421 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 OR7G1Q8NGA0 311 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 OR5K2Q8NHB8 316 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 C11orf45Q8TAV5 145 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 NUBPLQ8TB37 319 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 ZNF519Q8TB69 540 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 SLC7A13Q8TCU3 470 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 MRGPRDQ8TDS7 321 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 RNF170Q96K19 258 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 SORT1Q99523 831 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 LGMNQ99538 433 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 DEFB129Q9H1M3 183 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 OPN3Q9H1Y3 402 aaPredicted RBP3.98□□□□□ -1.77
LSM5-205ENST00000409952 PARLQ9H300 379 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 AMBNQ9NP70 447 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 HRASLS2Q9NWW9 162 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 MS4A12Q9NXJ0 267 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 NDE1Q9NXR1 346 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 EURLQ9NYK6 297 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 STMN3Q9NZ72 180 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 WWOXQ9NZC7 414 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 CCDC59Q9P031 241 aaKnown RBP3.98□□□□□ -1.77
LSM5-205ENST00000409952 TMEM181Q9P2C4 612 aa3.98□□□□□ -1.77
LSM5-205ENST00000409952 YARS2Q9Y2Z4 477 aaKnown RBP3.98□□□□□ -1.77
LSM5-205ENST00000409952 ADGRA3Q8IWK6 1321 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 A0A1B0GTH9 108 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 SLC22A20A6NK97 555 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 ZNF705EA8MWA4 302 aaPredicted RBP3.97□□□□□ -1.77
LSM5-205ENST00000409952 RSPH10B2B2RC85 870 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 LOC110117498-PIK3R3F6TDL0 507 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 CDC7O00311 574 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 PDHXO00330 501 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 DCTN6O00399 190 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 EEDO75530 441 aaKnown RBP3.97□□□□□ -1.77
LSM5-205ENST00000409952 KLHL2O95198 593 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 LALBAP00709 142 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 KLK1P06870 262 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 RSPH10BP0C881 870 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 BGNP21810 368 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 NBL1P41271 181 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 ALDH3B2P48448 385 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 SSR4P51571 173 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 RIDAP52758 137 aaKnown RBP3.97□□□□□ -1.77
LSM5-205ENST00000409952 NANOS2P60321 138 aaKnown RBP3.97□□□□□ -1.77
LSM5-205ENST00000409952 KRTAP10-7P60409 375 aaPredicted RBP3.97□□□□□ -1.77
LSM5-205ENST00000409952 IRX3P78415 501 aaPredicted RBP3.97□□□□□ -1.77
LSM5-205ENST00000409952 ADARB1P78563 741 aaKnown RBP3.97□□□□□ -1.77
LSM5-205ENST00000409952 CHRNB3Q05901 458 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 SERTAD2Q14140 314 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 TRAM2Q15035 370 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 CNPY1Q3B7I2 92 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 GPRC6AQ5T6X5 926 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 ZNF771Q7L3S4 317 aaPredicted RBP3.97□□□□□ -1.77
LSM5-205ENST00000409952 CMC1Q7Z7K0 106 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 ZBED8Q8IZ13 594 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 SYS1Q8N2H4 156 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 RFLNBQ8N5W9 214 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 DNAAF3Q8N9W5 541 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 SSC4DQ8WTU2 575 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 TAF15Q92804 592 aaKnown RBP eCLIP3.97□□□□□ -1.77
LSM5-205ENST00000409952 NEIL2Q969S2 332 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 GMPPAQ96IJ6 420 aaPredicted RBP3.97□□□□□ -1.77
LSM5-205ENST00000409952 CPB2Q96IY4 423 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 MRPL45Q9BRJ2 306 aaKnown RBP3.97□□□□□ -1.77
LSM5-205ENST00000409952 CWH43Q9H720 699 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 BEX1Q9HBH7 125 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 CD209Q9NNX6 404 aa3.97□□□□□ -1.77
LSM5-205ENST00000409952 GREB1LQ9C091 1923 aaPredicted RBP3.96□□□□□ -1.78
LSM5-205ENST00000409952 IGHV4-30-2A0A087WSY4 118 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 A0A1W2PQ72 361 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 A0A1W2PRF3 423 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 A0A1W2PRM7 423 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 FAM231BA6NCW3 169 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 FOXI3A8MTJ6 420 aaPredicted RBP3.96□□□□□ -1.78
LSM5-205ENST00000409952 MPTX1A8MV57 137 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 NTN3O00634 580 aaPredicted RBP3.96□□□□□ -1.78
LSM5-205ENST00000409952 SCAMP2O15127 329 aaKnown RBP3.96□□□□□ -1.78
LSM5-205ENST00000409952 XRCC2O43543 280 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 GPX5O75715 221 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 CLIC3O95833 236 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 CST4P01036 141 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 IGHV2-5P01817 119 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 RPN2P04844 631 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 CT45A10P0DMU9 189 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 GSSP48637 474 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 THBS3P49746 956 aa3.96□□□□□ -1.78
LSM5-205ENST00000409952 ARHGDIBP52566 201 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms