RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 CMTM3Q96MX0 182 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 ZNF888P0CJ79 500 aaPredicted RBP16.34■□□□□ 0.21
SMPD4-202ENST00000409031 VASPP50552 380 aaPredicted RBP16.34■□□□□ 0.21
SMPD4-202ENST00000409031 ZNF84P51523 738 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 UBE2MP61081 183 aaKnown RBP16.34■□□□□ 0.21
SMPD4-202ENST00000409031 RPS21P63220 83 aaKnown RBP16.34■□□□□ 0.21
SMPD4-202ENST00000409031 GSG1Q2KHT4 349 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 DLK2Q6UY11 383 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 TMEM64Q6YI46 380 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 GABRG1Q8N1C3 465 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 OR1S1Q8NH92 325 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 SMIM19Q96E16 107 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 METTL7AQ9H8H3 244 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 WDR76Q9H967 626 aa16.34■□□□□ 0.21
SMPD4-202ENST00000409031 GPR55Q9Y2T6 319 aaPredicted RBP16.34■□□□□ 0.21
SMPD4-202ENST00000409031 ITGB2P05107 769 aa16.33■□□□□ 0.21
SMPD4-202ENST00000409031 RD3LP0DJH9 198 aa16.33■□□□□ 0.21
SMPD4-202ENST00000409031 YOD1Q5VVQ6 348 aaPredicted RBP16.33■□□□□ 0.21
SMPD4-202ENST00000409031 ZNF705AQ6ZN79 300 aaPredicted RBP16.33■□□□□ 0.21
SMPD4-202ENST00000409031 RHOUQ7L0Q8 258 aa16.33■□□□□ 0.21
SMPD4-202ENST00000409031 DPF3Q92784 378 aa16.33■□□□□ 0.21
SMPD4-202ENST00000409031 BORCS8Q96FH0 119 aa16.33■□□□□ 0.21
SMPD4-202ENST00000409031 SCLYQ96I15 445 aa16.33■□□□□ 0.21
SMPD4-202ENST00000409031 SELENOIQ9C0D9 397 aa16.33■□□□□ 0.21
SMPD4-202ENST00000409031 SLC6A13Q9NSD5 602 aa16.33■□□□□ 0.21
SMPD4-202ENST00000409031 NUP205Q92621 2012 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 CPED1A4D0V7 1026 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 MAGEB4O15481 346 aaPredicted RBP16.33■□□□□ 0.2
SMPD4-202ENST00000409031 OR4E1P0C645 316 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 NPPBP16860 134 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 GBX1Q14549 363 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 DAZLQ92904 295 aaKnown RBP16.33■□□□□ 0.2
SMPD4-202ENST00000409031 TAAR2Q9P1P5 351 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 PLEKHB1Q9UF11 243 aaPredicted RBP16.33■□□□□ 0.2
SMPD4-202ENST00000409031 FBXO7Q9Y3I1 522 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 IGLON5A6NGN9 336 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 UMAD1C9J7I0 102 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 HOXA1P49639 335 aaPredicted RBP16.33■□□□□ 0.2
SMPD4-202ENST00000409031 F2RL1P55085 397 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 LINC00303Q3SY05 128 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 TRMT2BQ96GJ1 504 aaKnown RBP16.33■□□□□ 0.2
SMPD4-202ENST00000409031 RAB22AQ9UL26 194 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 ZNF587BE7ETH6 402 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 GFYI3L273 518 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 HMGN4O00479 90 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 TYRP1P17643 537 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 CSF2RBP32927 897 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 CTSOP43234 321 aaPredicted RBP16.33■□□□□ 0.2
SMPD4-202ENST00000409031 IHHQ14623 411 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 GLYATL3Q5SZD4 288 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 WBP2NLQ6ICG8 309 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 IL34Q6ZMJ4 242 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 C1orf87Q8N0U7 546 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 OR9K2Q8NGE7 335 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 ZFYVE21Q9BQ24 234 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 LDAHQ9H6V9 325 aa16.33■□□□□ 0.2
SMPD4-202ENST00000409031 ATXN7L1Q9ULK2 861 aaPredicted RBP16.33■□□□□ 0.2
SMPD4-202ENST00000409031 PKD1L3Q7Z443 1732 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 HIDE1A8MVS5 230 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 A8MXE2 369 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 SERPINE2P07093 398 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 CPMP14384 443 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 DCTDP32321 178 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 MPEG1Q2M385 716 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 ZNF385BQ569K4 471 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 TMEM71Q6P5X7 295 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 DPY19L4Q7Z388 723 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 TMEM25Q86YD3 366 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 GALNT16Q8N428 558 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 CPXM2Q8N436 756 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 IL17RCQ8NAC3 791 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 NINJ1Q92982 152 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 TMPRSS5Q9H3S3 457 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 PCYT1BQ9Y5K3 369 aaPredicted RBP16.32■□□□□ 0.2
SMPD4-202ENST00000409031 VSTM2BA6NLU5 285 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 DFFBO76075 338 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 HSD17B11Q8NBQ5 300 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 BPIFCQ8NFQ6 507 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 OR6S1Q8NH40 331 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 ZNF251Q9BRH9 671 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 ENY2Q9NPA8 101 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 TUBGCP6Q96RT7 1819 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.32■□□□□ 0.2
SMPD4-202ENST00000409031 MSTNO14793 375 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 GLCEO94923 617 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 OR13C7P0DN81 318 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 SSTP61278 116 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 SNRPEP62304 92 aaKnown RBP16.32■□□□□ 0.2
SMPD4-202ENST00000409031 CDK5R1Q15078 307 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 TP53I13Q8NBR0 393 aaPredicted RBP16.32■□□□□ 0.2
SMPD4-202ENST00000409031 BBS1Q8NFJ9 593 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 WDR77Q9BQA1 342 aaPredicted RBP16.32■□□□□ 0.2
SMPD4-202ENST00000409031 KCNS2Q9ULS6 477 aa16.32■□□□□ 0.2
SMPD4-202ENST00000409031 HMSDA8MTL9 139 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 B4DGG1 531 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 TXNDC12O95881 172 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 IGLV3-25P01717 112 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 FAAP20Q6NZ36 180 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 NKAIN3Q8N8D7 197 aa16.31■□□□□ 0.2
SMPD4-202ENST00000409031 OR1J1Q8NGS3 322 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms