RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 C10orf111Q8N326 155 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 CIARTQ8N365 385 aaPredicted RBP7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 OR10A6Q8NH74 314 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 VANGL1Q8TAA9 524 aaPredicted RBP7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 ADAMTS16Q8TE57 1224 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 LZICQ8WZA0 190 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 HIST1H2ACQ93077 130 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 LRRC58Q96CX6 371 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 OR2M2Q96R28 347 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 SMR3AQ99954 134 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 ULBP2Q9BZM5 246 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 PCDHAC1Q9H158 963 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 CRLF2Q9HC73 371 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 GPR35Q9HC97 309 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 MED4Q9NPJ6 270 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 NANSQ9NR45 359 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 B3GAT1Q9P2W7 334 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 CRNNQ9UBG3 495 aaPredicted RBP7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 ZNF229Q9UJW7 825 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 MOKQ9UQ07 419 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 POFUT2Q9Y2G5 429 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 CAPN7Q9Y6W3 813 aa7.93□□□□□ -1.14
SNORD88A-201ENST00000408314 IGHV1-18A0A0C4DH31 117 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 B9A039 149 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 RNF223E7ERA6 249 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 NDUFS8O00217 210 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 MGRN1O60291 552 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 FARS2O95363 451 aaKnown RBP7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 IGKV3-15P01624 115 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 IGLV1-44P01699 117 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 OPN1SWP03999 348 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 ADORA3P0DMS8 318 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 UMPSP11172 480 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 CBR1P16152 277 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 CBLP22681 906 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 SERPINF1P36955 418 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 RBM34P42696 430 aaKnown RBP7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 CAPZA2P47755 286 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 CSNK1A1P48729 337 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 EFNA4P52798 201 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 TAS2R41P59536 307 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 RPS23P62266 143 aaKnown RBP7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 ARF1P84077 181 aaKnown RBP7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 NAAAQ02083 359 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 KLF10Q13118 480 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 DUSP7Q16829 419 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 REP15Q6BDI9 236 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 NANOGP8Q6NSW7 305 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 B3GLCTQ6Y288 498 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 DNM1P46Q6ZS02 220 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 Q71RC1 249 aaPredicted RBP7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 SLC46A3Q7Z3Q1 461 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 NANOGNBQ7Z5D8 188 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 C20orf196Q8IYI0 205 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 TMEM123Q8N131 208 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 KDM8Q8N371 416 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 NUP37Q8NFH4 326 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 OR6T1Q8NGN1 323 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 FAM168AQ92567 244 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 ZNF442Q9H7R0 627 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 NANOGQ9H9S0 305 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 CA10Q9NS85 328 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 FGFR1OP2Q9NVK5 253 aa7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 ZNF469Q96JG9 3925 aaPredicted RBP7.92□□□□□ -1.14
SNORD88A-201ENST00000408314 HEATR1Q9H583 2144 aaKnown RBP7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 A0A096LPE4 126 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 A0A1W2PPZ6 126 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 SLC35F4A4IF30 521 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 GMNCA6NCL1 334 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 FAM220BPB1ANY3 271 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 CENPBD1B2RD01 187 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 M0R3G1 203 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 PLPP3O14495 311 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 CCDC22O60826 627 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 SASH3O75995 380 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 UBL3O95164 117 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 OR5F1O95221 314 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 RAB36O95755 333 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 IGF2P01344 180 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 CECR9P0C854 216 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 THRBP10828 461 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 PCSK6P29122 969 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 PPOXP50336 477 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 IDH3GP51553 393 aaPredicted RBP7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 ZP4Q12836 540 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 SELPLGQ14242 412 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 EFNB3Q15768 340 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 ZNF74Q16587 644 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 GSG1Q2KHT4 349 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 LINC00114Q6XXX2 140 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 ZNF813Q6ZN06 617 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 SLC35D2Q76EJ3 337 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 ZNF627Q7L945 461 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 COMTD1Q86VU5 262 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 ZNF540Q8NDQ6 660 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 OR2T12Q8NG77 320 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 GPR32P1Q8NGA4 272 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 OR6X1Q8NH79 312 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 ZNF566Q969W8 418 aa7.91□□□□□ -1.14
SNORD88A-201ENST00000408314 TAMM41Q96BW9 452 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms