RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ARL6IP5O75915 188 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 HIST1H2ABP04908 130 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 CD63P08962 238 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 RAB40ALP0C0E4 278 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 MAOAP21397 527 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 SLC2A5P22732 501 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 TALDO1P37837 337 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 RPS5P46782 204 aaKnown RBP11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 INPP1P49441 399 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 EIF2B2P49770 351 aaKnown RBP11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 NRG3P56975 720 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 FXYD6P3P58550 94 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 CHAF1BQ13112 559 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 ASAH1Q13510 395 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 RIN1Q13671 783 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 GGTLC2Q14390 218 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 ZNF791Q3KP31 576 aaPredicted RBP11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 GLYR1Q49A26 553 aaPredicted RBP11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 CCDC58Q4VC31 144 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 PYDC2Q56P42 97 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 HACD4Q5VWC8 232 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 MRPL14Q6P1L8 145 aaKnown RBP11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 HIST3H2AQ7L7L0 130 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 VASH1Q7L8A9 365 aaPredicted RBP11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 ZAR1Q86SH2 424 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 SIRT6Q8N6T7 355 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 FAM71CQ8NEG0 241 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 HIST1H2ACQ93077 130 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 TRMT61AQ96FX7 289 aaKnown RBP11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 C5orf34Q96MH7 638 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 FAM210AQ96ND0 272 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 GPX7Q96SL4 187 aaPredicted RBP11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 CNN2Q99439 309 aaKnown RBP11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 MNTQ99583 582 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 TM9SF2Q99805 663 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 GPR87Q9BY21 358 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 RBCK1Q9BYM8 510 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 SLC26A1Q9H2B4 701 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 MCCC2Q9HCC0 563 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 MOV10Q9HCE1 1003 aaKnown RBP11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 PNO1Q9NRX1 252 aaKnown RBP11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 CTSFQ9UBX1 484 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 CHRNA9Q9UGM1 479 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 IL20RAQ9UHF4 553 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 TEKT2Q9UIF3 430 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 V9GYH0 126 aa11.71□□□□□ -0.53
SMARCB1-203ENST00000407082 SHANK1Q9Y566 2161 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 SETD2Q9BYW2 2564 aaPredicted RBP11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 IGLV3-12A0A075B6K2 115 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 A0A1W2PQD3 144 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 WIPF3A6NGB9 483 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 ANKRD61A6NGH8 418 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 TGFBR3LH3BV60 316 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 BOLA2-SMG1P6H3BVE0 249 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 GPRIN2O60269 458 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 CDC123O75794 336 aaPredicted RBP11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 GATBO75879 557 aaKnown RBP11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 NGFRP08138 427 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 TRAPPC2P0DI81 140 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 TRAPPC2BP0DI82 140 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 IL7P13232 177 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 IL12BP29460 328 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 TMED10P49755 219 aaKnown RBP11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 SLC37A1P57057 533 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 CRMP1Q14194 572 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 VWA2Q5GFL6 755 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 TRIQKQ629K1 86 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 HBMQ6B0K9 141 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 KIRREL2Q6UWL6 708 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 THSD4Q6ZMP0 1018 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 SHISA6Q6ZSJ9 500 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 GDPD3Q7L5L3 318 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 SLC29A4Q7RTT9 530 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 KCTD20Q7Z5Y7 419 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 SNX29P2Q8IUI4 249 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 LAX1Q8IWV1 398 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 PRSS58Q8IYP2 241 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 SHISA5Q8N114 240 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 OR4N2Q8NGD1 307 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 OR52E2Q8NGJ4 325 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 OR5M3Q8NGP4 307 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 STT3BQ8TCJ2 826 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 PHOSPHO1Q8TCT1 267 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 HPS1Q92902 700 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 TTYH2Q9BSA4 534 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 HDHD5Q9BXW7 423 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 TGIF2Q9GZN2 237 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 RERGLQ9H628 205 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 WDR54Q9H977 334 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 ADGRL4Q9HBW9 690 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 POLE4Q9NR33 117 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 LANCL2Q9NS86 450 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 TCFL5Q9UL49 500 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 IER3IP1Q9Y5U9 82 aa11.7□□□□□ -0.54
SMARCB1-203ENST00000407082 VSTM2BA6NLU5 285 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 J3QLW9 94 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 TO15178 435 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 REM1O75628 298 aa11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 KLF7O75840 302 aaPredicted RBP11.69□□□□□ -0.54
SMARCB1-203ENST00000407082 UTS2O95399 124 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms